Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Ube4bQ9ES00 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Ube4bQ9ES00 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC11.13□□□□□ -0.63
Ube4bQ9ES00 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Ube4bQ9ES00 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Ube4bQ9ES00 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC11.13□□□□□ -0.63
Ube4bQ9ES00 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC11.13□□□□□ -0.63
Ube4bQ9ES00 Gm32025-201ENSMUST00000217960 307 ntBASIC11.13□□□□□ -0.63
Ube4bQ9ES00 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ube4bQ9ES00 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ube4bQ9ES00 Gm45234-201ENSMUST00000129411 4359 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
Ube4bQ9ES00 Gpc4-201ENSMUST00000033450 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ube4bQ9ES00 Fbxl18-202ENSMUST00000110766 7857 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ube4bQ9ES00 Tulp2-210ENSMUST00000210868 1664 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Ube4bQ9ES00 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ube4bQ9ES00 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ube4bQ9ES00 Esco1-201ENSMUST00000025142 4433 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ube4bQ9ES00 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Ube4bQ9ES00 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC11.13□□□□□ -0.63
Ube4bQ9ES00 Olfr315-202ENSMUST00000203256 2458 ntAPPRIS P1 TSL 3 BASIC11.13□□□□□ -0.63
Ube4bQ9ES00 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Ube4bQ9ES00 C130013H08Rik-201ENSMUST00000197569 3692 ntBASIC11.13□□□□□ -0.63
Ube4bQ9ES00 1700018A04Rik-204ENSMUST00000221561 2569 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Ube4bQ9ES00 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Ube4bQ9ES00 Tmem231-201ENSMUST00000034429 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ube4bQ9ES00 Htr1d-203ENSMUST00000121571 2426 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ube4bQ9ES00 Calu-201ENSMUST00000031779 3229 ntAPPRIS P5 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ube4bQ9ES00 Stat5a-202ENSMUST00000107356 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ube4bQ9ES00 Ncam1-203ENSMUST00000192584 2525 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Ube4bQ9ES00 Gtf3c6-206ENSMUST00000217537 2526 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ube4bQ9ES00 Gm35850-202ENSMUST00000211705 2120 ntBASIC11.12□□□□□ -0.63
Ube4bQ9ES00 C1rl-201ENSMUST00000049124 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ube4bQ9ES00 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ube4bQ9ES00 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC11.12□□□□□ -0.63
Ube4bQ9ES00 Atp9b-201ENSMUST00000091790 5357 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Ube4bQ9ES00 Col6a6-203ENSMUST00000166431 7098 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Ube4bQ9ES00 Gm5420-201ENSMUST00000071008 2206 ntTSL 2 BASIC11.12□□□□□ -0.63
Ube4bQ9ES00 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ube4bQ9ES00 Gm6714-201ENSMUST00000218677 2330 ntBASIC11.12□□□□□ -0.63
Ube4bQ9ES00 Kcne2-201ENSMUST00000047383 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ube4bQ9ES00 Synpo2l-201ENSMUST00000057090 4394 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Ube4bQ9ES00 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Ube4bQ9ES00 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Ube4bQ9ES00 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ube4bQ9ES00 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC11.12□□□□□ -0.63
Ube4bQ9ES00 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC11.12□□□□□ -0.63
Ube4bQ9ES00 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC11.12□□□□□ -0.63
Ube4bQ9ES00 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC11.12□□□□□ -0.63
Ube4bQ9ES00 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Ube4bQ9ES00 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ube4bQ9ES00 Gm7029-201ENSMUST00000173226 450 ntBASIC11.12□□□□□ -0.63
Ube4bQ9ES00 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC11.12□□□□□ -0.63
Ube4bQ9ES00 Gm29127-201ENSMUST00000188304 517 ntBASIC11.12□□□□□ -0.63
Ube4bQ9ES00 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC11.12□□□□□ -0.63
Ube4bQ9ES00 Gm38230-201ENSMUST00000193572 1159 ntBASIC11.12□□□□□ -0.63
Ube4bQ9ES00 Gm43438-201ENSMUST00000198133 379 ntBASIC11.12□□□□□ -0.63
Ube4bQ9ES00 Gm43818-201ENSMUST00000200605 466 ntBASIC11.12□□□□□ -0.63
Ube4bQ9ES00 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Ube4bQ9ES00 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Ube4bQ9ES00 Slc23a2-201ENSMUST00000028815 6364 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ube4bQ9ES00 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ube4bQ9ES00 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ube4bQ9ES00 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ube4bQ9ES00 Gm24526-201ENSMUST00000082921 158 ntBASIC11.12□□□□□ -0.63
Ube4bQ9ES00 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Ube4bQ9ES00 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Ube4bQ9ES00 Gm43242-201ENSMUST00000199507 1776 ntBASIC11.12□□□□□ -0.63
Ube4bQ9ES00 Dmbx1-203ENSMUST00000124071 4017 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ube4bQ9ES00 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ube4bQ9ES00 Arhgap33os-201ENSMUST00000124276 2648 ntTSL 2 BASIC11.12□□□□□ -0.63
Ube4bQ9ES00 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC11.12□□□□□ -0.63
Ube4bQ9ES00 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Ube4bQ9ES00 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ube4bQ9ES00 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ube4bQ9ES00 Gmip-202ENSMUST00000123453 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ube4bQ9ES00 Sgk3-203ENSMUST00000168907 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ube4bQ9ES00 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ube4bQ9ES00 Tfap2b-204ENSMUST00000187754 3023 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Ube4bQ9ES00 Grik1-201ENSMUST00000023652 3554 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ube4bQ9ES00 Ifih1-201ENSMUST00000028259 5470 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ube4bQ9ES00 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ube4bQ9ES00 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Ube4bQ9ES00 Pigq-219ENSMUST00000208071 2926 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Ube4bQ9ES00 Srp54a-207ENSMUST00000110708 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ube4bQ9ES00 Gdi1-201ENSMUST00000015435 2666 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ube4bQ9ES00 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ube4bQ9ES00 Lao1-201ENSMUST00000058651 2349 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ube4bQ9ES00 Gm21986-201ENSMUST00000113671 5560 ntTSL 2 BASIC11.11□□□□□ -0.63
Ube4bQ9ES00 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Ube4bQ9ES00 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
Ube4bQ9ES00 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
Ube4bQ9ES00 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Ube4bQ9ES00 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ube4bQ9ES00 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC11.11□□□□□ -0.63
Ube4bQ9ES00 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC11.11□□□□□ -0.63
Ube4bQ9ES00 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Ube4bQ9ES00 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Ube4bQ9ES00 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC11.11□□□□□ -0.63
Ube4bQ9ES00 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ube4bQ9ES00 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 61 ms