Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC11.86□□□□□ -0.51
Cldnd1Q9CQX5 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cldnd1Q9CQX5 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cldnd1Q9CQX5 Lrp2bp-201ENSMUST00000066451 1525 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cldnd1Q9CQX5 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cldnd1Q9CQX5 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cldnd1Q9CQX5 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cldnd1Q9CQX5 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
Cldnd1Q9CQX5 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cldnd1Q9CQX5 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cldnd1Q9CQX5 Gm5780-201ENSMUST00000217774 1834 ntBASIC11.86□□□□□ -0.51
Cldnd1Q9CQX5 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cldnd1Q9CQX5 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cldnd1Q9CQX5 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
Cldnd1Q9CQX5 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cldnd1Q9CQX5 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC11.86□□□□□ -0.51
Cldnd1Q9CQX5 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Cldnd1Q9CQX5 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cldnd1Q9CQX5 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cldnd1Q9CQX5 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cldnd1Q9CQX5 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cldnd1Q9CQX5 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cldnd1Q9CQX5 Gcg-201ENSMUST00000102733 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cldnd1Q9CQX5 Gm15172-201ENSMUST00000118945 1046 ntBASIC11.86□□□□□ -0.51
Cldnd1Q9CQX5 Gm11205-201ENSMUST00000137738 431 ntTSL 5 BASIC11.86□□□□□ -0.51
Cldnd1Q9CQX5 Gm11417-201ENSMUST00000150536 920 ntTSL 2 BASIC11.86□□□□□ -0.51
Cldnd1Q9CQX5 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC11.86□□□□□ -0.51
Cldnd1Q9CQX5 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC11.86□□□□□ -0.51
Cldnd1Q9CQX5 Gm27956-201ENSMUST00000175604 260 ntBASIC11.86□□□□□ -0.51
Cldnd1Q9CQX5 2410002F23Rik-220ENSMUST00000191537 872 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Cldnd1Q9CQX5 Gm37197-201ENSMUST00000195607 401 ntBASIC11.86□□□□□ -0.51
Cldnd1Q9CQX5 Nme6-214ENSMUST00000200468 865 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
Cldnd1Q9CQX5 Gm4903-201ENSMUST00000210462 405 ntBASIC11.86□□□□□ -0.51
Cldnd1Q9CQX5 Gm45469-201ENSMUST00000210468 854 ntTSL 3 BASIC11.86□□□□□ -0.51
Cldnd1Q9CQX5 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC11.86□□□□□ -0.51
Cldnd1Q9CQX5 Gm9758-201ENSMUST00000035980 1167 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cldnd1Q9CQX5 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cldnd1Q9CQX5 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC11.86□□□□□ -0.51
Cldnd1Q9CQX5 4930572O03Rik-201ENSMUST00000092696 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cldnd1Q9CQX5 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cldnd1Q9CQX5 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC11.86□□□□□ -0.51
Cldnd1Q9CQX5 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC11.86□□□□□ -0.51
Cldnd1Q9CQX5 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cldnd1Q9CQX5 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cldnd1Q9CQX5 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cldnd1Q9CQX5 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
Cldnd1Q9CQX5 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cldnd1Q9CQX5 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cldnd1Q9CQX5 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cldnd1Q9CQX5 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cldnd1Q9CQX5 Gm38089-201ENSMUST00000193585 1514 ntBASIC11.86□□□□□ -0.51
Cldnd1Q9CQX5 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC11.86□□□□□ -0.51
Cldnd1Q9CQX5 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cldnd1Q9CQX5 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cldnd1Q9CQX5 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cldnd1Q9CQX5 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cldnd1Q9CQX5 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cldnd1Q9CQX5 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cldnd1Q9CQX5 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cldnd1Q9CQX5 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC11.85□□□□□ -0.51
Cldnd1Q9CQX5 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Cldnd1Q9CQX5 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cldnd1Q9CQX5 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cldnd1Q9CQX5 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cldnd1Q9CQX5 Gm18983-201ENSMUST00000222884 2729 ntBASIC11.85□□□□□ -0.51
Cldnd1Q9CQX5 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cldnd1Q9CQX5 Gm8271-201ENSMUST00000171053 1469 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Cldnd1Q9CQX5 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cldnd1Q9CQX5 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cldnd1Q9CQX5 S100a3-201ENSMUST00000001047 712 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cldnd1Q9CQX5 Fam107b-202ENSMUST00000115052 861 ntTSL 3 BASIC11.85□□□□□ -0.51
Cldnd1Q9CQX5 Gm15528-201ENSMUST00000117821 864 ntBASIC11.85□□□□□ -0.51
Cldnd1Q9CQX5 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cldnd1Q9CQX5 Pax4-202ENSMUST00000164519 1229 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cldnd1Q9CQX5 Gm9372-201ENSMUST00000168454 430 ntBASIC11.85□□□□□ -0.51
Cldnd1Q9CQX5 7420461P10Rik-201ENSMUST00000169439 781 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cldnd1Q9CQX5 Pax4-203ENSMUST00000171089 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cldnd1Q9CQX5 Gm24328-201ENSMUST00000175104 67 ntBASIC11.85□□□□□ -0.51
Cldnd1Q9CQX5 Gm24954-201ENSMUST00000178831 110 ntBASIC11.85□□□□□ -0.51
Cldnd1Q9CQX5 Mir133a-1hg-201ENSMUST00000179771 395 ntTSL 3 BASIC11.85□□□□□ -0.51
Cldnd1Q9CQX5 Gm7939-201ENSMUST00000201233 1050 ntBASIC11.85□□□□□ -0.51
Cldnd1Q9CQX5 BC080696-201ENSMUST00000202858 1218 ntBASIC11.85□□□□□ -0.51
Cldnd1Q9CQX5 AC134248.1-201ENSMUST00000216113 1176 ntBASIC11.85□□□□□ -0.51
Cldnd1Q9CQX5 Gstz1-203ENSMUST00000220574 971 ntTSL 2 BASIC11.85□□□□□ -0.51
Cldnd1Q9CQX5 Gm31513-201ENSMUST00000223261 684 ntTSL 2 BASIC11.85□□□□□ -0.51
Cldnd1Q9CQX5 CT010480.2-201ENSMUST00000225424 737 ntBASIC11.85□□□□□ -0.51
Cldnd1Q9CQX5 AC102847.1-202ENSMUST00000226313 1245 ntBASIC11.85□□□□□ -0.51
Cldnd1Q9CQX5 AC138716.2-201ENSMUST00000226670 1016 ntBASIC11.85□□□□□ -0.51
Cldnd1Q9CQX5 AC105408.1-201ENSMUST00000227771 802 ntBASIC11.85□□□□□ -0.51
Cldnd1Q9CQX5 Crygf-201ENSMUST00000027082 627 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cldnd1Q9CQX5 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cldnd1Q9CQX5 Mrps11-201ENSMUST00000032840 1056 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cldnd1Q9CQX5 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cldnd1Q9CQX5 Nkg7-201ENSMUST00000070518 881 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cldnd1Q9CQX5 Rhox8-201ENSMUST00000071885 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cldnd1Q9CQX5 P2rx7-202ENSMUST00000086247 712 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cldnd1Q9CQX5 4631405J19Rik-201ENSMUST00000099699 1225 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cldnd1Q9CQX5 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC11.85□□□□□ -0.51
Cldnd1Q9CQX5 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC11.85□□□□□ -0.51
Cldnd1Q9CQX5 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 74.3 ms