Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Thumpd1Q99J36 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC10.33□□□□□ -0.75
Thumpd1Q99J36 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Thumpd1Q99J36 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Thumpd1Q99J36 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Thumpd1Q99J36 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Thumpd1Q99J36 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC10.33□□□□□ -0.76
Thumpd1Q99J36 Loxhd1-202ENSMUST00000096547 6595 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Thumpd1Q99J36 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC10.33□□□□□ -0.76
Thumpd1Q99J36 Actl7a-201ENSMUST00000095079 1513 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Thumpd1Q99J36 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Thumpd1Q99J36 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Thumpd1Q99J36 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC10.33□□□□□ -0.76
Thumpd1Q99J36 AC167669.2-201ENSMUST00000224417 1620 ntBASIC10.33□□□□□ -0.76
Thumpd1Q99J36 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Thumpd1Q99J36 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC10.33□□□□□ -0.76
Thumpd1Q99J36 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC10.33□□□□□ -0.76
Thumpd1Q99J36 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Thumpd1Q99J36 Cep250-204ENSMUST00000109619 7977 ntAPPRIS P4 TSL 5 BASIC10.33□□□□□ -0.76
Thumpd1Q99J36 Cep250-201ENSMUST00000039994 7979 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Thumpd1Q99J36 AC207128.2-201ENSMUST00000223708 1924 ntBASIC10.33□□□□□ -0.76
Thumpd1Q99J36 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Thumpd1Q99J36 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Thumpd1Q99J36 Itga11-201ENSMUST00000034774 4969 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Thumpd1Q99J36 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Thumpd1Q99J36 Gm42427-201ENSMUST00000200473 5292 ntBASIC10.33□□□□□ -0.76
Thumpd1Q99J36 Gm10686-201ENSMUST00000215389 3247 ntBASIC10.33□□□□□ -0.76
Thumpd1Q99J36 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Thumpd1Q99J36 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC10.33□□□□□ -0.76
Thumpd1Q99J36 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Thumpd1Q99J36 Gm12329-201ENSMUST00000120829 1007 ntBASIC10.33□□□□□ -0.76
Thumpd1Q99J36 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC10.33□□□□□ -0.76
Thumpd1Q99J36 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC10.33□□□□□ -0.76
Thumpd1Q99J36 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC10.33□□□□□ -0.76
Thumpd1Q99J36 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Thumpd1Q99J36 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC10.33□□□□□ -0.76
Thumpd1Q99J36 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC10.33□□□□□ -0.76
Thumpd1Q99J36 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Thumpd1Q99J36 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Thumpd1Q99J36 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC10.33□□□□□ -0.76
Thumpd1Q99J36 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC10.33□□□□□ -0.76
Thumpd1Q99J36 AC160929.1-201ENSMUST00000221247 415 ntBASIC10.33□□□□□ -0.76
Thumpd1Q99J36 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Thumpd1Q99J36 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Thumpd1Q99J36 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Thumpd1Q99J36 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Thumpd1Q99J36 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Thumpd1Q99J36 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Thumpd1Q99J36 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Thumpd1Q99J36 Gm10312-201ENSMUST00000078515 489 ntBASIC10.33□□□□□ -0.76
Thumpd1Q99J36 Adgrv1-214ENSMUST00000224088 1492 ntBASIC10.33□□□□□ -0.76
Thumpd1Q99J36 AC126444.1-201ENSMUST00000225938 1768 ntBASIC10.33□□□□□ -0.76
Thumpd1Q99J36 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC10.33□□□□□ -0.76
Thumpd1Q99J36 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Thumpd1Q99J36 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC10.33□□□□□ -0.76
Thumpd1Q99J36 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Thumpd1Q99J36 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Thumpd1Q99J36 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Thumpd1Q99J36 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Thumpd1Q99J36 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Thumpd1Q99J36 Gm43127-201ENSMUST00000195890 2789 ntBASIC10.33□□□□□ -0.76
Thumpd1Q99J36 Gm37613-201ENSMUST00000195677 3580 ntBASIC10.33□□□□□ -0.76
Thumpd1Q99J36 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Thumpd1Q99J36 Siglec1-203ENSMUST00000110227 5790 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Thumpd1Q99J36 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Thumpd1Q99J36 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Thumpd1Q99J36 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Thumpd1Q99J36 Gm5833-202ENSMUST00000190707 1932 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Thumpd1Q99J36 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Thumpd1Q99J36 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Thumpd1Q99J36 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Thumpd1Q99J36 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Thumpd1Q99J36 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Thumpd1Q99J36 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Thumpd1Q99J36 Cacna1c-224ENSMUST00000219018 7516 ntTSL 5 BASIC10.32□□□□□ -0.76
Thumpd1Q99J36 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Thumpd1Q99J36 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Thumpd1Q99J36 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Thumpd1Q99J36 Gm12015-201ENSMUST00000117065 843 ntBASIC10.32□□□□□ -0.76
Thumpd1Q99J36 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC10.32□□□□□ -0.76
Thumpd1Q99J36 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Thumpd1Q99J36 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC10.32□□□□□ -0.76
Thumpd1Q99J36 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC10.32□□□□□ -0.76
Thumpd1Q99J36 AC125070.1-201ENSMUST00000223523 555 ntTSL 5 BASIC10.32□□□□□ -0.76
Thumpd1Q99J36 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC10.32□□□□□ -0.76
Thumpd1Q99J36 CT009713.10-202ENSMUST00000225734 696 ntBASIC10.32□□□□□ -0.76
Thumpd1Q99J36 AC113031.8-201ENSMUST00000227856 631 ntBASIC10.32□□□□□ -0.76
Thumpd1Q99J36 AC126253.1-201ENSMUST00000227974 824 ntBASIC10.32□□□□□ -0.76
Thumpd1Q99J36 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Thumpd1Q99J36 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Thumpd1Q99J36 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Thumpd1Q99J36 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Thumpd1Q99J36 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Thumpd1Q99J36 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Thumpd1Q99J36 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Thumpd1Q99J36 Gm29358-202ENSMUST00000187941 3227 ntBASIC10.32□□□□□ -0.76
Thumpd1Q99J36 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Thumpd1Q99J36 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Thumpd1Q99J36 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Thumpd1Q99J36 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms