Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Rnf8Q8VC56 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Rnf8Q8VC56 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Rnf8Q8VC56 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rnf8Q8VC56 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rnf8Q8VC56 AC131586.1-201ENSMUST00000228844 2964 ntBASIC11.25□□□□□ -0.61
Rnf8Q8VC56 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rnf8Q8VC56 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rnf8Q8VC56 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rnf8Q8VC56 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rnf8Q8VC56 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC11.24□□□□□ -0.61
Rnf8Q8VC56 Bahcc1-203ENSMUST00000122148 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rnf8Q8VC56 Col6a6-203ENSMUST00000166431 7098 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Rnf8Q8VC56 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rnf8Q8VC56 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Rnf8Q8VC56 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rnf8Q8VC56 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rnf8Q8VC56 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rnf8Q8VC56 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rnf8Q8VC56 Gm15236-201ENSMUST00000117309 379 ntBASIC11.24□□□□□ -0.61
Rnf8Q8VC56 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Rnf8Q8VC56 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Rnf8Q8VC56 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC11.24□□□□□ -0.61
Rnf8Q8VC56 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC11.24□□□□□ -0.61
Rnf8Q8VC56 Gm5070-201ENSMUST00000177599 862 ntBASIC11.24□□□□□ -0.61
Rnf8Q8VC56 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Rnf8Q8VC56 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Rnf8Q8VC56 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC11.24□□□□□ -0.61
Rnf8Q8VC56 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC11.24□□□□□ -0.61
Rnf8Q8VC56 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Rnf8Q8VC56 AC153929.1-201ENSMUST00000219009 303 ntBASIC11.24□□□□□ -0.61
Rnf8Q8VC56 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Rnf8Q8VC56 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rnf8Q8VC56 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rnf8Q8VC56 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC11.24□□□□□ -0.61
Rnf8Q8VC56 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rnf8Q8VC56 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rnf8Q8VC56 Thbs2-201ENSMUST00000170872 5922 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rnf8Q8VC56 Ciita-201ENSMUST00000023147 5254 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rnf8Q8VC56 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Rnf8Q8VC56 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC11.24□□□□□ -0.61
Rnf8Q8VC56 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Rnf8Q8VC56 Gm18782-201ENSMUST00000209023 1399 ntBASIC11.24□□□□□ -0.61
Rnf8Q8VC56 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rnf8Q8VC56 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC11.24□□□□□ -0.61
Rnf8Q8VC56 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Rnf8Q8VC56 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Rnf8Q8VC56 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rnf8Q8VC56 Gm42141-201ENSMUST00000196534 2172 ntBASIC11.24□□□□□ -0.61
Rnf8Q8VC56 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rnf8Q8VC56 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Rnf8Q8VC56 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Rnf8Q8VC56 Gm43908-201ENSMUST00000205074 1472 ntBASIC11.24□□□□□ -0.61
Rnf8Q8VC56 Zbtb21-203ENSMUST00000113734 6010 ntAPPRIS P4 TSL 2 BASIC11.24□□□□□ -0.61
Rnf8Q8VC56 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC11.24□□□□□ -0.61
Rnf8Q8VC56 Tjp1-201ENSMUST00000032729 6102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rnf8Q8VC56 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rnf8Q8VC56 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rnf8Q8VC56 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC11.24□□□□□ -0.61
Rnf8Q8VC56 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rnf8Q8VC56 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Rnf8Q8VC56 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rnf8Q8VC56 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rnf8Q8VC56 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Rnf8Q8VC56 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rnf8Q8VC56 Gm38292-201ENSMUST00000192646 3045 ntBASIC11.23□□□□□ -0.61
Rnf8Q8VC56 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rnf8Q8VC56 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rnf8Q8VC56 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rnf8Q8VC56 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Rnf8Q8VC56 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rnf8Q8VC56 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Rnf8Q8VC56 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Rnf8Q8VC56 Gm12012-201ENSMUST00000118857 1066 ntBASIC11.23□□□□□ -0.61
Rnf8Q8VC56 Gm15808-201ENSMUST00000119046 604 ntBASIC11.23□□□□□ -0.61
Rnf8Q8VC56 Gm14017-201ENSMUST00000121934 386 ntBASIC11.23□□□□□ -0.61
Rnf8Q8VC56 Rprl1-201ENSMUST00000158050 327 ntBASIC11.23□□□□□ -0.61
Rnf8Q8VC56 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Rnf8Q8VC56 Gm8856-201ENSMUST00000185254 1144 ntBASIC11.23□□□□□ -0.61
Rnf8Q8VC56 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC11.23□□□□□ -0.61
Rnf8Q8VC56 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rnf8Q8VC56 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC11.23□□□□□ -0.61
Rnf8Q8VC56 Gm19994-201ENSMUST00000217086 586 ntBASIC11.23□□□□□ -0.61
Rnf8Q8VC56 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC11.23□□□□□ -0.61
Rnf8Q8VC56 AC093022.1-201ENSMUST00000226949 1072 ntBASIC11.23□□□□□ -0.61
Rnf8Q8VC56 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rnf8Q8VC56 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rnf8Q8VC56 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rnf8Q8VC56 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC11.23□□□□□ -0.61
Rnf8Q8VC56 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rnf8Q8VC56 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rnf8Q8VC56 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC11.23□□□□□ -0.61
Rnf8Q8VC56 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rnf8Q8VC56 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rnf8Q8VC56 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rnf8Q8VC56 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
Rnf8Q8VC56 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rnf8Q8VC56 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Rnf8Q8VC56 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rnf8Q8VC56 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms