Protein–RNA interactions for Protein: Q8C196

Cps1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, mousemouse

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cps1Q8C196 Gm6518-201ENSMUST00000208450 342 ntBASIC15.34■□□□□ 0.05
Cps1Q8C196 AC154407.1-201ENSMUST00000226777 526 ntBASIC15.34■□□□□ 0.05
Cps1Q8C196 Cstb-201ENSMUST00000005185 603 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cps1Q8C196 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cps1Q8C196 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cps1Q8C196 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Cps1Q8C196 Gm43365-201ENSMUST00000196522 2106 ntBASIC15.34■□□□□ 0.05
Cps1Q8C196 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cps1Q8C196 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cps1Q8C196 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cps1Q8C196 Mapk1ip1-201ENSMUST00000075667 1502 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cps1Q8C196 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Cps1Q8C196 Mkrn1-ps1-201ENSMUST00000122035 1390 ntBASIC15.33■□□□□ 0.05
Cps1Q8C196 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Cps1Q8C196 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Cps1Q8C196 Trbv31-201ENSMUST00000103300 334 ntAPPRIS ALT2 BASIC15.33■□□□□ 0.05
Cps1Q8C196 n-R5s130-201ENSMUST00000178128 119 ntBASIC15.33■□□□□ 0.05
Cps1Q8C196 Gm24312-201ENSMUST00000178677 119 ntBASIC15.33■□□□□ 0.05
Cps1Q8C196 n-R5s106-201ENSMUST00000179060 119 ntBASIC15.33■□□□□ 0.05
Cps1Q8C196 n-R5s118-201ENSMUST00000179887 119 ntBASIC15.33■□□□□ 0.05
Cps1Q8C196 Gm5210-201ENSMUST00000182150 1010 ntBASIC15.33■□□□□ 0.05
Cps1Q8C196 Mir8091-201ENSMUST00000183602 139 ntBASIC15.33■□□□□ 0.05
Cps1Q8C196 Platr10-202ENSMUST00000191479 818 ntBASIC15.33■□□□□ 0.05
Cps1Q8C196 Gm45258-201ENSMUST00000210042 853 ntBASIC15.33■□□□□ 0.05
Cps1Q8C196 Gm4930-201ENSMUST00000219926 1087 ntBASIC15.33■□□□□ 0.05
Cps1Q8C196 Gm10020-201ENSMUST00000081993 612 ntBASIC15.33■□□□□ 0.05
Cps1Q8C196 Ptges3l-201ENSMUST00000093933 748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Cps1Q8C196 Gm6478-201ENSMUST00000099450 742 ntBASIC15.33■□□□□ 0.05
Cps1Q8C196 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Cps1Q8C196 Slc38a5-201ENSMUST00000033512 1868 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Cps1Q8C196 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC15.33■□□□□ 0.05
Cps1Q8C196 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
Cps1Q8C196 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cps1Q8C196 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cps1Q8C196 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cps1Q8C196 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cps1Q8C196 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Cps1Q8C196 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cps1Q8C196 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cps1Q8C196 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cps1Q8C196 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cps1Q8C196 Vcp-rs-201ENSMUST00000120233 2406 ntBASIC15.33■□□□□ 0.04
Cps1Q8C196 Gm15965-201ENSMUST00000123318 1428 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Cps1Q8C196 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cps1Q8C196 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cps1Q8C196 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cps1Q8C196 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Cps1Q8C196 Selenbp2-204ENSMUST00000173849 1323 ntTSL 5 BASIC15.33■□□□□ 0.04
Cps1Q8C196 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC15.33■□□□□ 0.04
Cps1Q8C196 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Cps1Q8C196 Gm14592-201ENSMUST00000117201 560 ntBASIC15.33■□□□□ 0.04
Cps1Q8C196 Ccl19-ps1-201ENSMUST00000119621 327 ntBASIC15.33■□□□□ 0.04
Cps1Q8C196 Auts2-216ENSMUST00000185450 144 ntTSL 5 BASIC15.33■□□□□ 0.04
Cps1Q8C196 Gm6644-201ENSMUST00000186507 951 ntBASIC15.33■□□□□ 0.04
Cps1Q8C196 Gm33080-201ENSMUST00000205429 172 ntBASIC15.33■□□□□ 0.04
Cps1Q8C196 Gm45680-201ENSMUST00000211135 214 ntTSL 3 BASIC15.33■□□□□ 0.04
Cps1Q8C196 Zfp445-205ENSMUST00000214626 1220 ntTSL 5 BASIC15.33■□□□□ 0.04
Cps1Q8C196 Arhgef33-210ENSMUST00000225548 456 ntBASIC15.33■□□□□ 0.04
Cps1Q8C196 AC164099.1-201ENSMUST00000227780 333 ntBASIC15.33■□□□□ 0.04
Cps1Q8C196 Defb29-201ENSMUST00000060598 462 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cps1Q8C196 Gm7735-201ENSMUST00000089098 159 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Cps1Q8C196 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cps1Q8C196 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
Cps1Q8C196 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cps1Q8C196 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cps1Q8C196 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cps1Q8C196 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cps1Q8C196 Fhitos-201ENSMUST00000160149 1511 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Cps1Q8C196 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Cps1Q8C196 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC15.32■□□□□ 0.04
Cps1Q8C196 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cps1Q8C196 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cps1Q8C196 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cps1Q8C196 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Cps1Q8C196 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC15.32■□□□□ 0.04
Cps1Q8C196 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cps1Q8C196 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC15.32■□□□□ 0.04
Cps1Q8C196 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cps1Q8C196 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Cps1Q8C196 Ifna9-201ENSMUST00000102807 573 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Cps1Q8C196 Mir1249-201ENSMUST00000116791 98 ntBASIC15.32■□□□□ 0.04
Cps1Q8C196 Gm26313-201ENSMUST00000157770 308 ntBASIC15.32■□□□□ 0.04
Cps1Q8C196 Gm24294-201ENSMUST00000158295 277 ntBASIC15.32■□□□□ 0.04
Cps1Q8C196 Gm24943-201ENSMUST00000158329 433 ntBASIC15.32■□□□□ 0.04
Cps1Q8C196 Rpl41-201ENSMUST00000176010 582 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cps1Q8C196 Rpl41-204ENSMUST00000176906 509 ntAPPRIS ALT2 TSL 3 BASIC15.32■□□□□ 0.04
Cps1Q8C196 Gm5335-201ENSMUST00000182995 1000 ntBASIC15.32■□□□□ 0.04
Cps1Q8C196 Gm6358-202ENSMUST00000187643 489 ntAPPRIS P5 BASIC15.32■□□□□ 0.04
Cps1Q8C196 A930036I15Rik-201ENSMUST00000196018 1045 ntBASIC15.32■□□□□ 0.04
Cps1Q8C196 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Cps1Q8C196 Ifnl3-201ENSMUST00000078364 582 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cps1Q8C196 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cps1Q8C196 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Cps1Q8C196 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cps1Q8C196 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Cps1Q8C196 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Cps1Q8C196 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cps1Q8C196 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cps1Q8C196 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cps1Q8C196 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 77.3 ms