Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trim50Q810I2 AC160410.1-201ENSMUST00000219298 1972 ntBASIC11.32□□□□□ -0.6
Trim50Q810I2 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trim50Q810I2 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trim50Q810I2 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trim50Q810I2 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trim50Q810I2 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trim50Q810I2 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trim50Q810I2 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trim50Q810I2 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trim50Q810I2 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trim50Q810I2 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Trim50Q810I2 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC11.32□□□□□ -0.6
Trim50Q810I2 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Trim50Q810I2 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim50Q810I2 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim50Q810I2 Zfp236-202ENSMUST00000182122 6059 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim50Q810I2 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC11.31□□□□□ -0.6
Trim50Q810I2 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Trim50Q810I2 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim50Q810I2 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC11.31□□□□□ -0.6
Trim50Q810I2 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim50Q810I2 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim50Q810I2 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim50Q810I2 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Trim50Q810I2 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim50Q810I2 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim50Q810I2 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trim50Q810I2 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim50Q810I2 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Trim50Q810I2 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC11.31□□□□□ -0.6
Trim50Q810I2 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim50Q810I2 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trim50Q810I2 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trim50Q810I2 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC11.31□□□□□ -0.6
Trim50Q810I2 Gm45113-201ENSMUST00000207518 165 ntBASIC11.31□□□□□ -0.6
Trim50Q810I2 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC11.31□□□□□ -0.6
Trim50Q810I2 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim50Q810I2 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim50Q810I2 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trim50Q810I2 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim50Q810I2 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim50Q810I2 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim50Q810I2 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trim50Q810I2 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim50Q810I2 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
Trim50Q810I2 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim50Q810I2 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim50Q810I2 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Trim50Q810I2 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim50Q810I2 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Trim50Q810I2 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim50Q810I2 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim50Q810I2 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim50Q810I2 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
Trim50Q810I2 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trim50Q810I2 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim50Q810I2 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim50Q810I2 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trim50Q810I2 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim50Q810I2 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim50Q810I2 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim50Q810I2 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC11.3□□□□□ -0.6
Trim50Q810I2 Fam53a-203ENSMUST00000065162 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim50Q810I2 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trim50Q810I2 AC126257.2-201ENSMUST00000215507 2300 ntBASIC11.3□□□□□ -0.6
Trim50Q810I2 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trim50Q810I2 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim50Q810I2 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim50Q810I2 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trim50Q810I2 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim50Q810I2 Gm12217-201ENSMUST00000118858 696 ntBASIC11.3□□□□□ -0.6
Trim50Q810I2 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim50Q810I2 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC11.3□□□□□ -0.6
Trim50Q810I2 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trim50Q810I2 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC11.3□□□□□ -0.6
Trim50Q810I2 Gm18734-201ENSMUST00000172937 808 ntBASIC11.3□□□□□ -0.6
Trim50Q810I2 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC11.3□□□□□ -0.6
Trim50Q810I2 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Trim50Q810I2 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC11.3□□□□□ -0.6
Trim50Q810I2 Gm4482-201ENSMUST00000200876 742 ntBASIC11.3□□□□□ -0.6
Trim50Q810I2 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Trim50Q810I2 Gm6867-201ENSMUST00000219165 425 ntBASIC11.3□□□□□ -0.6
Trim50Q810I2 Lect2-202ENSMUST00000225183 823 ntBASIC11.3□□□□□ -0.6
Trim50Q810I2 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim50Q810I2 Gm10288-201ENSMUST00000084614 537 ntBASIC11.3□□□□□ -0.6
Trim50Q810I2 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC11.3□□□□□ -0.6
Trim50Q810I2 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC11.3□□□□□ -0.6
Trim50Q810I2 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim50Q810I2 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim50Q810I2 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim50Q810I2 Myo18a-224ENSMUST00000172303 6339 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim50Q810I2 Gm7841-201ENSMUST00000122108 1629 ntBASIC11.3□□□□□ -0.6
Trim50Q810I2 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim50Q810I2 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim50Q810I2 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim50Q810I2 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC11.3□□□□□ -0.6
Trim50Q810I2 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim50Q810I2 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trim50Q810I2 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms