Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pif1Q80SX8 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC10.86□□□□□ -0.67
Pif1Q80SX8 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC10.86□□□□□ -0.67
Pif1Q80SX8 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Pif1Q80SX8 Prpf40b-202ENSMUST00000118287 3129 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pif1Q80SX8 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pif1Q80SX8 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Pif1Q80SX8 Gm37368-201ENSMUST00000193173 3212 ntBASIC10.86□□□□□ -0.67
Pif1Q80SX8 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC10.86□□□□□ -0.67
Pif1Q80SX8 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pif1Q80SX8 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Pif1Q80SX8 Gm9164-201ENSMUST00000118700 1014 ntBASIC10.86□□□□□ -0.67
Pif1Q80SX8 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pif1Q80SX8 Gm13328-201ENSMUST00000120816 1020 ntBASIC10.86□□□□□ -0.67
Pif1Q80SX8 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC10.86□□□□□ -0.67
Pif1Q80SX8 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC10.86□□□□□ -0.67
Pif1Q80SX8 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Pif1Q80SX8 Gm15904-201ENSMUST00000154515 487 ntTSL 3 BASIC10.86□□□□□ -0.67
Pif1Q80SX8 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pif1Q80SX8 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Pif1Q80SX8 Mir6998-201ENSMUST00000183343 64 ntBASIC10.86□□□□□ -0.67
Pif1Q80SX8 Gm18558-201ENSMUST00000186253 1214 ntBASIC10.86□□□□□ -0.67
Pif1Q80SX8 Gm42518-201ENSMUST00000196277 938 ntBASIC10.86□□□□□ -0.67
Pif1Q80SX8 Gm45574-201ENSMUST00000210921 331 ntBASIC10.86□□□□□ -0.67
Pif1Q80SX8 Gm2875-201ENSMUST00000211333 360 ntBASIC10.86□□□□□ -0.67
Pif1Q80SX8 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC10.86□□□□□ -0.67
Pif1Q80SX8 AC156801.1-201ENSMUST00000216158 493 ntTSL 5 BASIC10.86□□□□□ -0.67
Pif1Q80SX8 Gm6867-201ENSMUST00000219165 425 ntBASIC10.86□□□□□ -0.67
Pif1Q80SX8 AC099645.1-201ENSMUST00000226476 1105 ntBASIC10.86□□□□□ -0.67
Pif1Q80SX8 AC122350.1-201ENSMUST00000228135 533 ntBASIC10.86□□□□□ -0.67
Pif1Q80SX8 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pif1Q80SX8 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Pif1Q80SX8 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pif1Q80SX8 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pif1Q80SX8 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Pif1Q80SX8 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
Pif1Q80SX8 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pif1Q80SX8 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Pif1Q80SX8 Gm21136-201ENSMUST00000186812 2575 ntBASIC10.86□□□□□ -0.67
Pif1Q80SX8 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC10.86□□□□□ -0.67
Pif1Q80SX8 Gm44806-201ENSMUST00000205574 2303 ntBASIC10.86□□□□□ -0.67
Pif1Q80SX8 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Pif1Q80SX8 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pif1Q80SX8 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pif1Q80SX8 Gm29100-201ENSMUST00000187564 4410 ntBASIC10.86□□□□□ -0.67
Pif1Q80SX8 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pif1Q80SX8 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Pif1Q80SX8 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pif1Q80SX8 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pif1Q80SX8 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pif1Q80SX8 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Pif1Q80SX8 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pif1Q80SX8 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Pif1Q80SX8 Lgi1-204ENSMUST00000196090 1789 ntTSL 5 BASIC10.85□□□□□ -0.67
Pif1Q80SX8 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Pif1Q80SX8 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Pif1Q80SX8 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pif1Q80SX8 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Pif1Q80SX8 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pif1Q80SX8 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pif1Q80SX8 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Pif1Q80SX8 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC10.85□□□□□ -0.67
Pif1Q80SX8 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Pif1Q80SX8 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pif1Q80SX8 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC10.85□□□□□ -0.67
Pif1Q80SX8 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Pif1Q80SX8 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pif1Q80SX8 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pif1Q80SX8 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pif1Q80SX8 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC10.85□□□□□ -0.67
Pif1Q80SX8 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC10.85□□□□□ -0.67
Pif1Q80SX8 Gm12899-201ENSMUST00000120565 551 ntBASIC10.85□□□□□ -0.67
Pif1Q80SX8 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Pif1Q80SX8 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC10.85□□□□□ -0.67
Pif1Q80SX8 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Pif1Q80SX8 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC10.85□□□□□ -0.67
Pif1Q80SX8 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC10.85□□□□□ -0.67
Pif1Q80SX8 Rn7s6-201ENSMUST00000175005 291 ntBASIC10.85□□□□□ -0.67
Pif1Q80SX8 Gm5706-201ENSMUST00000181525 993 ntBASIC10.85□□□□□ -0.67
Pif1Q80SX8 Gm43520-201ENSMUST00000197996 164 ntBASIC10.85□□□□□ -0.67
Pif1Q80SX8 Gm42599-201ENSMUST00000201308 469 ntBASIC10.85□□□□□ -0.67
Pif1Q80SX8 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Pif1Q80SX8 Gm44421-201ENSMUST00000205064 1221 ntBASIC10.85□□□□□ -0.67
Pif1Q80SX8 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC10.85□□□□□ -0.67
Pif1Q80SX8 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC10.85□□□□□ -0.67
Pif1Q80SX8 AC166344.1-201ENSMUST00000223745 674 ntBASIC10.85□□□□□ -0.67
Pif1Q80SX8 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Pif1Q80SX8 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pif1Q80SX8 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pif1Q80SX8 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pif1Q80SX8 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Pif1Q80SX8 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pif1Q80SX8 Gm5380-201ENSMUST00000119296 2136 ntBASIC10.85□□□□□ -0.67
Pif1Q80SX8 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Pif1Q80SX8 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pif1Q80SX8 Gm18198-201ENSMUST00000204986 1551 ntBASIC10.85□□□□□ -0.67
Pif1Q80SX8 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Pif1Q80SX8 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pif1Q80SX8 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pif1Q80SX8 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms