Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Rnf220Q6PDX6 AC167013.1-201ENSMUST00000228592 202 ntBASIC10.99□□□□□ -0.65
Rnf220Q6PDX6 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC10.99□□□□□ -0.65
Rnf220Q6PDX6 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rnf220Q6PDX6 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rnf220Q6PDX6 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rnf220Q6PDX6 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC10.99□□□□□ -0.65
Rnf220Q6PDX6 AC154352.1-201ENSMUST00000221477 2365 ntBASIC10.99□□□□□ -0.65
Rnf220Q6PDX6 Rpgr-202ENSMUST00000072393 2380 ntAPPRIS ALT2 TSL 2 BASIC10.99□□□□□ -0.65
Rnf220Q6PDX6 Pigq-219ENSMUST00000208071 2926 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Rnf220Q6PDX6 Slc5a9-201ENSMUST00000102719 2460 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rnf220Q6PDX6 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rnf220Q6PDX6 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rnf220Q6PDX6 Fam26e-201ENSMUST00000069125 5323 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rnf220Q6PDX6 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC10.99□□□□□ -0.65
Rnf220Q6PDX6 Nop2-201ENSMUST00000044200 2597 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rnf220Q6PDX6 4930488L21Rik-202ENSMUST00000212638 3164 ntTSL 5 BASIC10.99□□□□□ -0.65
Rnf220Q6PDX6 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Rnf220Q6PDX6 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Rnf220Q6PDX6 Esr2-205ENSMUST00000218621 3342 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Rnf220Q6PDX6 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rnf220Q6PDX6 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rnf220Q6PDX6 Arpp21-217ENSMUST00000161412 1687 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Rnf220Q6PDX6 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rnf220Q6PDX6 Hdac9-206ENSMUST00000209990 3072 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Rnf220Q6PDX6 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Rnf220Q6PDX6 Gm8036-201ENSMUST00000118089 1718 ntBASIC10.98□□□□□ -0.65
Rnf220Q6PDX6 Med24-202ENSMUST00000100500 3133 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Rnf220Q6PDX6 Cln3-204ENSMUST00000116269 2487 ntAPPRIS P2 TSL 5 BASIC10.98□□□□□ -0.65
Rnf220Q6PDX6 Sh3bgrl2-203ENSMUST00000188030 2549 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Rnf220Q6PDX6 Rasal1-205ENSMUST00000156722 3251 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rnf220Q6PDX6 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Rnf220Q6PDX6 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Rnf220Q6PDX6 Gm45597-201ENSMUST00000211524 1994 ntBASIC10.98□□□□□ -0.65
Rnf220Q6PDX6 Sun1-205ENSMUST00000110883 3714 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rnf220Q6PDX6 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rnf220Q6PDX6 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Rnf220Q6PDX6 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
Rnf220Q6PDX6 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC10.98□□□□□ -0.65
Rnf220Q6PDX6 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Rnf220Q6PDX6 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC10.98□□□□□ -0.65
Rnf220Q6PDX6 Gm27682-201ENSMUST00000183930 110 ntBASIC10.98□□□□□ -0.65
Rnf220Q6PDX6 Gm27243-201ENSMUST00000183964 521 ntBASIC10.98□□□□□ -0.65
Rnf220Q6PDX6 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Rnf220Q6PDX6 Gm44882-201ENSMUST00000205702 802 ntBASIC10.98□□□□□ -0.65
Rnf220Q6PDX6 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rnf220Q6PDX6 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rnf220Q6PDX6 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rnf220Q6PDX6 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rnf220Q6PDX6 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rnf220Q6PDX6 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rnf220Q6PDX6 Gm10268-201ENSMUST00000085340 555 ntBASIC10.98□□□□□ -0.65
Rnf220Q6PDX6 Lrsam1-201ENSMUST00000028132 3981 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rnf220Q6PDX6 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rnf220Q6PDX6 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rnf220Q6PDX6 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rnf220Q6PDX6 Cfap61-204ENSMUST00000126415 2256 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Rnf220Q6PDX6 Zer1-201ENSMUST00000044751 4100 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Rnf220Q6PDX6 Gm7789-202ENSMUST00000211273 1400 ntBASIC10.98□□□□□ -0.65
Rnf220Q6PDX6 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Rnf220Q6PDX6 Zfp964-203ENSMUST00000204285 4333 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rnf220Q6PDX6 Gm5884-201ENSMUST00000036712 1479 ntBASIC10.98□□□□□ -0.65
Rnf220Q6PDX6 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rnf220Q6PDX6 Anxa6-202ENSMUST00000108883 2489 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rnf220Q6PDX6 Vipas39-202ENSMUST00000072744 2524 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rnf220Q6PDX6 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rnf220Q6PDX6 Gm37827-201ENSMUST00000194486 1542 ntBASIC10.98□□□□□ -0.65
Rnf220Q6PDX6 Actl7a-201ENSMUST00000095079 1513 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Rnf220Q6PDX6 Fbxo8-201ENSMUST00000040218 3571 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rnf220Q6PDX6 Thsd4-201ENSMUST00000034829 4816 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Rnf220Q6PDX6 Itgad-201ENSMUST00000033051 3965 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rnf220Q6PDX6 Gm5860-202ENSMUST00000151038 1711 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Rnf220Q6PDX6 Oas1h-201ENSMUST00000072476 1703 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rnf220Q6PDX6 Rab27a-201ENSMUST00000034722 2979 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rnf220Q6PDX6 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rnf220Q6PDX6 Ank1-204ENSMUST00000117270 5652 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Rnf220Q6PDX6 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC10.97□□□□□ -0.65
Rnf220Q6PDX6 Vstm2a-201ENSMUST00000109645 3264 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rnf220Q6PDX6 Hps4-202ENSMUST00000112359 3345 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Rnf220Q6PDX6 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rnf220Q6PDX6 2210010C04Rik-201ENSMUST00000031931 2142 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rnf220Q6PDX6 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC10.97□□□□□ -0.65
Rnf220Q6PDX6 9430064I24Rik-201ENSMUST00000206516 2669 ntBASIC10.97□□□□□ -0.65
Rnf220Q6PDX6 Hyou1-206ENSMUST00000161318 4489 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Rnf220Q6PDX6 Agbl2-201ENSMUST00000037206 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rnf220Q6PDX6 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Rnf220Q6PDX6 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rnf220Q6PDX6 Copb1-201ENSMUST00000033012 3346 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rnf220Q6PDX6 Sirpa-204ENSMUST00000103203 3674 ntAPPRIS P3 TSL 5 BASIC10.97□□□□□ -0.65
Rnf220Q6PDX6 Anks1b-218ENSMUST00000182595 3715 ntTSL 5 BASIC10.97□□□□□ -0.65
Rnf220Q6PDX6 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC10.97□□□□□ -0.65
Rnf220Q6PDX6 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC10.97□□□□□ -0.65
Rnf220Q6PDX6 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rnf220Q6PDX6 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC10.97□□□□□ -0.65
Rnf220Q6PDX6 Gm29127-201ENSMUST00000188304 517 ntBASIC10.97□□□□□ -0.65
Rnf220Q6PDX6 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC10.97□□□□□ -0.65
Rnf220Q6PDX6 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC10.97□□□□□ -0.65
Rnf220Q6PDX6 Tyms-ps-201ENSMUST00000219550 915 ntBASIC10.97□□□□□ -0.65
Rnf220Q6PDX6 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rnf220Q6PDX6 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms