Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Rc3h1Q4VGL6 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rc3h1Q4VGL6 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rc3h1Q4VGL6 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rc3h1Q4VGL6 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rc3h1Q4VGL6 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Rc3h1Q4VGL6 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rc3h1Q4VGL6 Gm15549-201ENSMUST00000121595 622 ntBASIC13.45□□□□□ -0.26
Rc3h1Q4VGL6 Gm13299-201ENSMUST00000133644 425 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Rc3h1Q4VGL6 Gm13307-202ENSMUST00000142990 425 ntTSL 5 BASIC13.45□□□□□ -0.26
Rc3h1Q4VGL6 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Rc3h1Q4VGL6 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC13.45□□□□□ -0.26
Rc3h1Q4VGL6 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Rc3h1Q4VGL6 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC13.45□□□□□ -0.26
Rc3h1Q4VGL6 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC13.45□□□□□ -0.26
Rc3h1Q4VGL6 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC13.45□□□□□ -0.26
Rc3h1Q4VGL6 Gm5996-201ENSMUST00000211110 718 ntBASIC13.45□□□□□ -0.26
Rc3h1Q4VGL6 Gm2875-201ENSMUST00000211333 360 ntBASIC13.45□□□□□ -0.26
Rc3h1Q4VGL6 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Rc3h1Q4VGL6 Gm43760-201ENSMUST00000202120 3015 ntBASIC13.45□□□□□ -0.26
Rc3h1Q4VGL6 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rc3h1Q4VGL6 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Rc3h1Q4VGL6 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rc3h1Q4VGL6 Gm3836-201ENSMUST00000211377 1613 ntBASIC13.45□□□□□ -0.26
Rc3h1Q4VGL6 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rc3h1Q4VGL6 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Rc3h1Q4VGL6 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC13.45□□□□□ -0.26
Rc3h1Q4VGL6 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rc3h1Q4VGL6 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rc3h1Q4VGL6 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rc3h1Q4VGL6 Gm43172-201ENSMUST00000202139 2137 ntBASIC13.45□□□□□ -0.26
Rc3h1Q4VGL6 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rc3h1Q4VGL6 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rc3h1Q4VGL6 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rc3h1Q4VGL6 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC13.45□□□□□ -0.26
Rc3h1Q4VGL6 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rc3h1Q4VGL6 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rc3h1Q4VGL6 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rc3h1Q4VGL6 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rc3h1Q4VGL6 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rc3h1Q4VGL6 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Rc3h1Q4VGL6 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rc3h1Q4VGL6 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rc3h1Q4VGL6 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rc3h1Q4VGL6 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rc3h1Q4VGL6 AC122860.2-201ENSMUST00000217967 2671 ntBASIC13.44□□□□□ -0.26
Rc3h1Q4VGL6 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rc3h1Q4VGL6 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rc3h1Q4VGL6 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rc3h1Q4VGL6 Gm15329-201ENSMUST00000121408 155 ntBASIC13.44□□□□□ -0.26
Rc3h1Q4VGL6 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Rc3h1Q4VGL6 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Rc3h1Q4VGL6 Gm36943-201ENSMUST00000194422 282 ntBASIC13.44□□□□□ -0.26
Rc3h1Q4VGL6 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC13.44□□□□□ -0.26
Rc3h1Q4VGL6 Gm44953-201ENSMUST00000208745 1286 ntBASIC13.44□□□□□ -0.26
Rc3h1Q4VGL6 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Rc3h1Q4VGL6 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC13.44□□□□□ -0.26
Rc3h1Q4VGL6 Gm36377-201ENSMUST00000220833 757 ntTSL 2 BASIC13.44□□□□□ -0.26
Rc3h1Q4VGL6 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC13.44□□□□□ -0.26
Rc3h1Q4VGL6 AC154257.1-202ENSMUST00000224729 843 ntBASIC13.44□□□□□ -0.26
Rc3h1Q4VGL6 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rc3h1Q4VGL6 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rc3h1Q4VGL6 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Rc3h1Q4VGL6 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Rc3h1Q4VGL6 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rc3h1Q4VGL6 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rc3h1Q4VGL6 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rc3h1Q4VGL6 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rc3h1Q4VGL6 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rc3h1Q4VGL6 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rc3h1Q4VGL6 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Rc3h1Q4VGL6 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC13.43□□□□□ -0.26
Rc3h1Q4VGL6 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rc3h1Q4VGL6 Gm13384-201ENSMUST00000117166 1344 ntBASIC13.43□□□□□ -0.26
Rc3h1Q4VGL6 Gm42651-201ENSMUST00000199851 1339 ntBASIC13.43□□□□□ -0.26
Rc3h1Q4VGL6 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rc3h1Q4VGL6 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Rc3h1Q4VGL6 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Rc3h1Q4VGL6 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rc3h1Q4VGL6 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Rc3h1Q4VGL6 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rc3h1Q4VGL6 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rc3h1Q4VGL6 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Rc3h1Q4VGL6 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Rc3h1Q4VGL6 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rc3h1Q4VGL6 Ica1-202ENSMUST00000115518 1256 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Rc3h1Q4VGL6 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC13.43□□□□□ -0.26
Rc3h1Q4VGL6 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC13.43□□□□□ -0.26
Rc3h1Q4VGL6 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rc3h1Q4VGL6 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rc3h1Q4VGL6 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rc3h1Q4VGL6 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Rc3h1Q4VGL6 Gm7741-201ENSMUST00000181445 989 ntBASIC13.43□□□□□ -0.26
Rc3h1Q4VGL6 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC13.43□□□□□ -0.26
Rc3h1Q4VGL6 Gm37826-201ENSMUST00000195329 322 ntBASIC13.43□□□□□ -0.26
Rc3h1Q4VGL6 Gm35960-201ENSMUST00000202712 767 ntBASIC13.43□□□□□ -0.26
Rc3h1Q4VGL6 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC13.43□□□□□ -0.26
Rc3h1Q4VGL6 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC13.43□□□□□ -0.26
Rc3h1Q4VGL6 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC13.43□□□□□ -0.26
Rc3h1Q4VGL6 Gm18065-201ENSMUST00000221395 526 ntBASIC13.43□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms