Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Syne3Q4FZC9 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC12.34□□□□□ -0.43
Syne3Q4FZC9 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Syne3Q4FZC9 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC12.33□□□□□ -0.43
Syne3Q4FZC9 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Syne3Q4FZC9 Gm37422-201ENSMUST00000193794 4718 ntBASIC12.33□□□□□ -0.43
Syne3Q4FZC9 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Syne3Q4FZC9 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Syne3Q4FZC9 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Syne3Q4FZC9 Gm18262-201ENSMUST00000222560 1946 ntBASIC12.33□□□□□ -0.44
Syne3Q4FZC9 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Syne3Q4FZC9 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC12.33□□□□□ -0.44
Syne3Q4FZC9 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC12.33□□□□□ -0.44
Syne3Q4FZC9 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Syne3Q4FZC9 Gm7642-201ENSMUST00000216345 1809 ntBASIC12.33□□□□□ -0.44
Syne3Q4FZC9 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Syne3Q4FZC9 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Syne3Q4FZC9 Gm23596-201ENSMUST00000104304 132 ntBASIC12.33□□□□□ -0.44
Syne3Q4FZC9 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Syne3Q4FZC9 Gm15004-201ENSMUST00000119192 630 ntBASIC12.33□□□□□ -0.44
Syne3Q4FZC9 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC12.33□□□□□ -0.44
Syne3Q4FZC9 Gm28686-201ENSMUST00000187404 609 ntBASIC12.33□□□□□ -0.44
Syne3Q4FZC9 Gm38114-201ENSMUST00000191877 1232 ntBASIC12.33□□□□□ -0.44
Syne3Q4FZC9 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Syne3Q4FZC9 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Syne3Q4FZC9 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Syne3Q4FZC9 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC12.33□□□□□ -0.44
Syne3Q4FZC9 Gm21027-201ENSMUST00000219300 1236 ntBASIC12.33□□□□□ -0.44
Syne3Q4FZC9 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC12.33□□□□□ -0.44
Syne3Q4FZC9 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Syne3Q4FZC9 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Syne3Q4FZC9 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Syne3Q4FZC9 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Syne3Q4FZC9 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Syne3Q4FZC9 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC12.33□□□□□ -0.44
Syne3Q4FZC9 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Syne3Q4FZC9 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Syne3Q4FZC9 Gm43773-201ENSMUST00000198548 2162 ntBASIC12.33□□□□□ -0.44
Syne3Q4FZC9 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Syne3Q4FZC9 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Syne3Q4FZC9 Gm15991-202ENSMUST00000212123 3565 ntBASIC12.33□□□□□ -0.44
Syne3Q4FZC9 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Syne3Q4FZC9 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Syne3Q4FZC9 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Syne3Q4FZC9 Gm21136-201ENSMUST00000186812 2575 ntBASIC12.32□□□□□ -0.44
Syne3Q4FZC9 Gm6605-201ENSMUST00000031488 2574 ntBASIC12.32□□□□□ -0.44
Syne3Q4FZC9 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Syne3Q4FZC9 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Syne3Q4FZC9 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC12.32□□□□□ -0.44
Syne3Q4FZC9 Col6a4-201ENSMUST00000121963 7371 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Syne3Q4FZC9 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Syne3Q4FZC9 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Syne3Q4FZC9 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Syne3Q4FZC9 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC12.32□□□□□ -0.44
Syne3Q4FZC9 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
Syne3Q4FZC9 Syt11-203ENSMUST00000107505 5020 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Syne3Q4FZC9 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Syne3Q4FZC9 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Syne3Q4FZC9 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Syne3Q4FZC9 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Syne3Q4FZC9 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Syne3Q4FZC9 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Syne3Q4FZC9 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Syne3Q4FZC9 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Syne3Q4FZC9 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Syne3Q4FZC9 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC12.32□□□□□ -0.44
Syne3Q4FZC9 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC12.32□□□□□ -0.44
Syne3Q4FZC9 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC12.32□□□□□ -0.44
Syne3Q4FZC9 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Syne3Q4FZC9 Mir6927-201ENSMUST00000184494 71 ntBASIC12.32□□□□□ -0.44
Syne3Q4FZC9 Gm3332-201ENSMUST00000189337 928 ntBASIC12.32□□□□□ -0.44
Syne3Q4FZC9 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Syne3Q4FZC9 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Syne3Q4FZC9 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC12.32□□□□□ -0.44
Syne3Q4FZC9 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC12.32□□□□□ -0.44
Syne3Q4FZC9 CT485787.1-201ENSMUST00000225617 968 ntBASIC12.32□□□□□ -0.44
Syne3Q4FZC9 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Syne3Q4FZC9 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Syne3Q4FZC9 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC12.32□□□□□ -0.44
Syne3Q4FZC9 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Syne3Q4FZC9 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Syne3Q4FZC9 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Syne3Q4FZC9 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Syne3Q4FZC9 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Syne3Q4FZC9 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Syne3Q4FZC9 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Syne3Q4FZC9 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Syne3Q4FZC9 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Syne3Q4FZC9 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Syne3Q4FZC9 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Syne3Q4FZC9 Gm9072-201ENSMUST00000218390 1514 ntBASIC12.32□□□□□ -0.44
Syne3Q4FZC9 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Syne3Q4FZC9 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Syne3Q4FZC9 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC12.31□□□□□ -0.44
Syne3Q4FZC9 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Syne3Q4FZC9 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Syne3Q4FZC9 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Syne3Q4FZC9 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC12.31□□□□□ -0.44
Syne3Q4FZC9 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Syne3Q4FZC9 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms