Protein–RNA interactions for Protein: Q0P5V2

Sobp, Sine oculis-binding protein homolog, mousemouse

Predictions only

Length 864 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SobpQ0P5V2 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
SobpQ0P5V2 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
SobpQ0P5V2 Oprm1-213ENSMUST00000105604 1616 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
SobpQ0P5V2 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SobpQ0P5V2 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
SobpQ0P5V2 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
SobpQ0P5V2 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
SobpQ0P5V2 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SobpQ0P5V2 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
SobpQ0P5V2 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SobpQ0P5V2 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SobpQ0P5V2 Gm7002-201ENSMUST00000221386 2165 ntBASIC13.2□□□□□ -0.3
SobpQ0P5V2 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SobpQ0P5V2 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC13.2□□□□□ -0.3
SobpQ0P5V2 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SobpQ0P5V2 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SobpQ0P5V2 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SobpQ0P5V2 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
SobpQ0P5V2 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SobpQ0P5V2 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SobpQ0P5V2 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SobpQ0P5V2 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SobpQ0P5V2 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC13.19□□□□□ -0.3
SobpQ0P5V2 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
SobpQ0P5V2 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
SobpQ0P5V2 Gm9796-201ENSMUST00000062249 2250 ntBASIC13.19□□□□□ -0.3
SobpQ0P5V2 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SobpQ0P5V2 Gm4735-201ENSMUST00000138679 1302 ntBASIC13.19□□□□□ -0.3
SobpQ0P5V2 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SobpQ0P5V2 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SobpQ0P5V2 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
SobpQ0P5V2 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC13.19□□□□□ -0.3
SobpQ0P5V2 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SobpQ0P5V2 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
SobpQ0P5V2 Nxpe1-ps-201ENSMUST00000209981 1454 ntBASIC13.19□□□□□ -0.3
SobpQ0P5V2 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC13.19□□□□□ -0.3
SobpQ0P5V2 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SobpQ0P5V2 Gm11655-201ENSMUST00000153899 765 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SobpQ0P5V2 Gm15699-201ENSMUST00000159213 280 ntTSL 5 BASIC13.19□□□□□ -0.3
SobpQ0P5V2 Gm29067-201ENSMUST00000190821 470 ntBASIC13.19□□□□□ -0.3
SobpQ0P5V2 Gm43564-201ENSMUST00000196185 211 ntBASIC13.19□□□□□ -0.3
SobpQ0P5V2 Gm2566-201ENSMUST00000201267 431 ntBASIC13.19□□□□□ -0.3
SobpQ0P5V2 Ndufa4-205ENSMUST00000204978 610 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SobpQ0P5V2 Gm44640-201ENSMUST00000206894 247 ntBASIC13.19□□□□□ -0.3
SobpQ0P5V2 AC132384.2-201ENSMUST00000218018 526 ntBASIC13.19□□□□□ -0.3
SobpQ0P5V2 Gm18621-201ENSMUST00000222677 679 ntBASIC13.19□□□□□ -0.3
SobpQ0P5V2 Scgb1c1-201ENSMUST00000035300 455 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
SobpQ0P5V2 Cstb-201ENSMUST00000005185 603 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SobpQ0P5V2 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
SobpQ0P5V2 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC13.19□□□□□ -0.3
SobpQ0P5V2 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC13.19□□□□□ -0.3
SobpQ0P5V2 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SobpQ0P5V2 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
SobpQ0P5V2 Gm7061-201ENSMUST00000118127 1416 ntBASIC13.19□□□□□ -0.3
SobpQ0P5V2 Olfr171-202ENSMUST00000205467 1406 ntAPPRIS ALT1 TSL 2 BASIC13.19□□□□□ -0.3
SobpQ0P5V2 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SobpQ0P5V2 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
SobpQ0P5V2 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SobpQ0P5V2 CT010480.4-201ENSMUST00000224654 2283 ntBASIC13.19□□□□□ -0.3
SobpQ0P5V2 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SobpQ0P5V2 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SobpQ0P5V2 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
SobpQ0P5V2 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
SobpQ0P5V2 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
SobpQ0P5V2 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC13.19□□□□□ -0.3
SobpQ0P5V2 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC13.19□□□□□ -0.3
SobpQ0P5V2 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SobpQ0P5V2 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
SobpQ0P5V2 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SobpQ0P5V2 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SobpQ0P5V2 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SobpQ0P5V2 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SobpQ0P5V2 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
SobpQ0P5V2 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SobpQ0P5V2 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SobpQ0P5V2 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
SobpQ0P5V2 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
SobpQ0P5V2 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC13.18□□□□□ -0.3
SobpQ0P5V2 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SobpQ0P5V2 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SobpQ0P5V2 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SobpQ0P5V2 Gm12947-201ENSMUST00000116114 420 ntBASIC13.18□□□□□ -0.3
SobpQ0P5V2 Zfp419-201ENSMUST00000173446 916 ntBASIC13.18□□□□□ -0.3
SobpQ0P5V2 Gm20443-201ENSMUST00000173840 735 ntTSL 3 BASIC13.18□□□□□ -0.3
SobpQ0P5V2 Gm3898-201ENSMUST00000180221 613 ntTSL 5 BASIC13.18□□□□□ -0.3
SobpQ0P5V2 Gm37597-201ENSMUST00000191853 382 ntBASIC13.18□□□□□ -0.3
SobpQ0P5V2 4930447C11Rik-201ENSMUST00000204503 928 ntBASIC13.18□□□□□ -0.3
SobpQ0P5V2 1700018G05Rik-201ENSMUST00000211116 386 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SobpQ0P5V2 AC156633.1-201ENSMUST00000215971 614 ntTSL 2 BASIC13.18□□□□□ -0.3
SobpQ0P5V2 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
SobpQ0P5V2 AC163646.3-201ENSMUST00000228879 772 ntBASIC13.18□□□□□ -0.3
SobpQ0P5V2 Gm7589-201ENSMUST00000085631 534 ntBASIC13.18□□□□□ -0.3
SobpQ0P5V2 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SobpQ0P5V2 Gm37582-201ENSMUST00000192953 1409 ntBASIC13.18□□□□□ -0.3
SobpQ0P5V2 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC13.18□□□□□ -0.3
SobpQ0P5V2 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
SobpQ0P5V2 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC13.18□□□□□ -0.3
SobpQ0P5V2 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SobpQ0P5V2 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SobpQ0P5V2 Sfxn1-201ENSMUST00000021930 2783 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms