Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Gm4775-201ENSMUST00000169588 402 ntBASIC10.75□□□□□ -0.69
Cacna1aP97445 Gm46210-201ENSMUST00000218800 577 ntTSL 3 BASIC10.75□□□□□ -0.69
Cacna1aP97445 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Cacna1aP97445 Kyat1-202ENSMUST00000113659 1367 ntTSL 5 BASIC10.75□□□□□ -0.69
Cacna1aP97445 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cacna1aP97445 Gm45643-201ENSMUST00000211364 1484 ntBASIC10.75□□□□□ -0.69
Cacna1aP97445 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Cacna1aP97445 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Cacna1aP97445 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cacna1aP97445 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Cacna1aP97445 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cacna1aP97445 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cacna1aP97445 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Cacna1aP97445 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Cacna1aP97445 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cacna1aP97445 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Cacna1aP97445 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cacna1aP97445 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cacna1aP97445 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cacna1aP97445 S100a3-201ENSMUST00000001047 712 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cacna1aP97445 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Cacna1aP97445 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Cacna1aP97445 AC142266.1-201ENSMUST00000228107 415 ntBASIC10.75□□□□□ -0.69
Cacna1aP97445 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cacna1aP97445 Vmn1r44-201ENSMUST00000089420 1108 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Cacna1aP97445 Slc45a4-202ENSMUST00000076224 4240 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cacna1aP97445 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cacna1aP97445 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC10.75□□□□□ -0.69
Cacna1aP97445 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cacna1aP97445 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cacna1aP97445 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cacna1aP97445 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cacna1aP97445 Gm31138-201ENSMUST00000212296 1705 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Cacna1aP97445 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Cacna1aP97445 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC10.74□□□□□ -0.69
Cacna1aP97445 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC10.74□□□□□ -0.69
Cacna1aP97445 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cacna1aP97445 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cacna1aP97445 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cacna1aP97445 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Cacna1aP97445 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC10.74□□□□□ -0.69
Cacna1aP97445 Cidec-203ENSMUST00000113091 785 ntAPPRIS ALT1 TSL 3 BASIC10.74□□□□□ -0.69
Cacna1aP97445 Gm12470-201ENSMUST00000117239 1049 ntBASIC10.74□□□□□ -0.69
Cacna1aP97445 Gm13267-202ENSMUST00000150099 281 ntTSL 2 BASIC10.74□□□□□ -0.69
Cacna1aP97445 Ccndbp1-208ENSMUST00000171260 1187 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Cacna1aP97445 Gm24809-201ENSMUST00000175318 271 ntBASIC10.74□□□□□ -0.69
Cacna1aP97445 Gm9884-201ENSMUST00000194343 1222 ntBASIC10.74□□□□□ -0.69
Cacna1aP97445 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC10.74□□□□□ -0.69
Cacna1aP97445 Gm7192-201ENSMUST00000210793 1137 ntBASIC10.74□□□□□ -0.69
Cacna1aP97445 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC10.74□□□□□ -0.69
Cacna1aP97445 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC10.74□□□□□ -0.69
Cacna1aP97445 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC10.74□□□□□ -0.69
Cacna1aP97445 Krtap4-13-201ENSMUST00000050106 815 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Cacna1aP97445 Spata46-201ENSMUST00000056991 771 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cacna1aP97445 Gm10263-201ENSMUST00000085163 300 ntBASIC10.74□□□□□ -0.69
Cacna1aP97445 Olfr584-201ENSMUST00000098210 964 ntBASIC10.74□□□□□ -0.69
Cacna1aP97445 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cacna1aP97445 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cacna1aP97445 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Cacna1aP97445 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cacna1aP97445 Gm18798-201ENSMUST00000187264 1700 ntBASIC10.74□□□□□ -0.69
Cacna1aP97445 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cacna1aP97445 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
Cacna1aP97445 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cacna1aP97445 Gm6641-201ENSMUST00000196100 1315 ntBASIC10.74□□□□□ -0.69
Cacna1aP97445 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC10.74□□□□□ -0.69
Cacna1aP97445 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Cacna1aP97445 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cacna1aP97445 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cacna1aP97445 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cacna1aP97445 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Cacna1aP97445 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Cacna1aP97445 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Cacna1aP97445 Ighv1-5-201ENSMUST00000103494 294 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Cacna1aP97445 Gm12179-201ENSMUST00000118344 1272 ntBASIC10.74□□□□□ -0.69
Cacna1aP97445 Spaca9-202ENSMUST00000124840 699 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cacna1aP97445 Gm24078-201ENSMUST00000158184 103 ntBASIC10.74□□□□□ -0.69
Cacna1aP97445 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC10.74□□□□□ -0.69
Cacna1aP97445 Psme1-208ENSMUST00000174259 1112 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cacna1aP97445 Gm21778-201ENSMUST00000178779 471 ntBASIC10.74□□□□□ -0.69
Cacna1aP97445 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC10.74□□□□□ -0.69
Cacna1aP97445 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC10.74□□□□□ -0.69
Cacna1aP97445 Tbc1d21-201ENSMUST00000040217 1283 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cacna1aP97445 Elob-201ENSMUST00000069579 508 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cacna1aP97445 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Cacna1aP97445 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Cacna1aP97445 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC10.74□□□□□ -0.69
Cacna1aP97445 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cacna1aP97445 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Cacna1aP97445 Meikin-201ENSMUST00000094193 1433 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cacna1aP97445 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Cacna1aP97445 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC10.73□□□□□ -0.69
Cacna1aP97445 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Cacna1aP97445 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Cacna1aP97445 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cacna1aP97445 Ccm2-203ENSMUST00000109722 1760 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Cacna1aP97445 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cacna1aP97445 Oprl1-204ENSMUST00000108767 1248 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cacna1aP97445 Gm13530-201ENSMUST00000134014 390 ntTSL 2 BASIC10.73□□□□□ -0.69
Cacna1aP97445 Gm20694-201ENSMUST00000176943 404 ntBASIC10.73□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms