Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Gm38151-201ENSMUST00000195085 289 ntBASIC10.88□□□□□ -0.67
Six5P70178 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC10.88□□□□□ -0.67
Six5P70178 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC10.88□□□□□ -0.67
Six5P70178 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC10.88□□□□□ -0.67
Six5P70178 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC10.88□□□□□ -0.67
Six5P70178 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Six5P70178 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Six5P70178 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC10.88□□□□□ -0.67
Six5P70178 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Six5P70178 Gm8420-201ENSMUST00000097103 598 ntBASIC10.88□□□□□ -0.67
Six5P70178 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Six5P70178 Cad-211ENSMUST00000202795 6559 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Six5P70178 Gripap1-203ENSMUST00000115675 3015 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Six5P70178 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Six5P70178 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Six5P70178 Nf1-202ENSMUST00000108251 9217 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Six5P70178 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC10.88□□□□□ -0.67
Six5P70178 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Six5P70178 Gm14150-201ENSMUST00000122404 1354 ntBASIC10.88□□□□□ -0.67
Six5P70178 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Six5P70178 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC10.88□□□□□ -0.67
Six5P70178 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Six5P70178 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Six5P70178 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Six5P70178 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC10.88□□□□□ -0.67
Six5P70178 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC10.88□□□□□ -0.67
Six5P70178 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Six5P70178 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Six5P70178 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Six5P70178 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Six5P70178 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Six5P70178 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC10.87□□□□□ -0.67
Six5P70178 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Six5P70178 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Six5P70178 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Six5P70178 Wipf2-201ENSMUST00000037480 7011 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Six5P70178 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Six5P70178 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Six5P70178 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Six5P70178 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Six5P70178 Trim25-201ENSMUST00000000284 5566 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Six5P70178 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC10.87□□□□□ -0.67
Six5P70178 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Six5P70178 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Six5P70178 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Six5P70178 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Six5P70178 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Six5P70178 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Six5P70178 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Six5P70178 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Six5P70178 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
Six5P70178 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC10.87□□□□□ -0.67
Six5P70178 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC10.87□□□□□ -0.67
Six5P70178 Gm13916-201ENSMUST00000117368 628 ntBASIC10.87□□□□□ -0.67
Six5P70178 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC10.87□□□□□ -0.67
Six5P70178 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC10.87□□□□□ -0.67
Six5P70178 Gm5733-201ENSMUST00000190232 939 ntBASIC10.87□□□□□ -0.67
Six5P70178 Gm6905-201ENSMUST00000205729 511 ntBASIC10.87□□□□□ -0.67
Six5P70178 Gm7848-201ENSMUST00000210739 718 ntBASIC10.87□□□□□ -0.67
Six5P70178 Lect2-202ENSMUST00000225183 823 ntBASIC10.87□□□□□ -0.67
Six5P70178 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Six5P70178 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Six5P70178 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Six5P70178 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Six5P70178 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Six5P70178 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Six5P70178 Cln8-201ENSMUST00000027554 6857 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Six5P70178 Akap12-202ENSMUST00000215696 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Six5P70178 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Six5P70178 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Six5P70178 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Six5P70178 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Six5P70178 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Six5P70178 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Six5P70178 Nrf1-206ENSMUST00000115204 2047 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Six5P70178 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Six5P70178 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Six5P70178 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Six5P70178 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Six5P70178 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Six5P70178 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Six5P70178 Carns1-201ENSMUST00000167055 3968 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Six5P70178 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
Six5P70178 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
Six5P70178 Gm10728-201ENSMUST00000194292 1829 ntBASIC10.86□□□□□ -0.67
Six5P70178 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Six5P70178 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Six5P70178 Bcl9l-203ENSMUST00000218183 6771 ntAPPRIS P2 TSL 5 BASIC10.86□□□□□ -0.67
Six5P70178 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Six5P70178 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Six5P70178 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Six5P70178 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Six5P70178 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Six5P70178 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC10.86□□□□□ -0.67
Six5P70178 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC10.86□□□□□ -0.67
Six5P70178 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Six5P70178 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Six5P70178 Gm45776-201ENSMUST00000212366 1522 ntBASIC10.86□□□□□ -0.67
Six5P70178 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Six5P70178 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC10.86□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 614.7 ms