Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Sec61a1P61620 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Sec61a1P61620 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC10.26□□□□□ -0.77
Sec61a1P61620 Chic1-201ENSMUST00000116547 7375 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Sec61a1P61620 Col6a4-201ENSMUST00000121963 7371 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Sec61a1P61620 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC10.26□□□□□ -0.77
Sec61a1P61620 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
Sec61a1P61620 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Sec61a1P61620 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC10.26□□□□□ -0.77
Sec61a1P61620 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC10.26□□□□□ -0.77
Sec61a1P61620 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Sec61a1P61620 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Sec61a1P61620 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC10.25□□□□□ -0.77
Sec61a1P61620 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Sec61a1P61620 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Sec61a1P61620 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC10.25□□□□□ -0.77
Sec61a1P61620 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Sec61a1P61620 Ctnnd1-204ENSMUST00000099941 5783 ntTSL 5 BASIC10.25□□□□□ -0.77
Sec61a1P61620 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Sec61a1P61620 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Sec61a1P61620 Abca2-201ENSMUST00000102919 8033 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Sec61a1P61620 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Sec61a1P61620 AC126444.1-201ENSMUST00000225938 1768 ntBASIC10.25□□□□□ -0.77
Sec61a1P61620 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Sec61a1P61620 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Sec61a1P61620 Gm4760-201ENSMUST00000119663 1030 ntBASIC10.25□□□□□ -0.77
Sec61a1P61620 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC10.25□□□□□ -0.77
Sec61a1P61620 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Sec61a1P61620 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Sec61a1P61620 Gm23119-201ENSMUST00000158610 140 ntBASIC10.25□□□□□ -0.77
Sec61a1P61620 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Sec61a1P61620 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC10.25□□□□□ -0.77
Sec61a1P61620 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Sec61a1P61620 AC166344.1-202ENSMUST00000224139 234 ntBASIC10.25□□□□□ -0.77
Sec61a1P61620 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Sec61a1P61620 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Sec61a1P61620 Gm10312-201ENSMUST00000078515 489 ntBASIC10.25□□□□□ -0.77
Sec61a1P61620 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Sec61a1P61620 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Sec61a1P61620 Gm5124-202ENSMUST00000132683 2083 ntBASIC10.25□□□□□ -0.77
Sec61a1P61620 Gm13135-201ENSMUST00000117628 3121 ntBASIC10.25□□□□□ -0.77
Sec61a1P61620 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Sec61a1P61620 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Sec61a1P61620 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Sec61a1P61620 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC10.25□□□□□ -0.77
Sec61a1P61620 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC10.25□□□□□ -0.77
Sec61a1P61620 Crry-ps-201ENSMUST00000079090 1309 ntBASIC10.25□□□□□ -0.77
Sec61a1P61620 Sema4a-201ENSMUST00000029700 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Sec61a1P61620 Gm10829-201ENSMUST00000202084 2988 ntBASIC10.25□□□□□ -0.77
Sec61a1P61620 Tm9sf1-202ENSMUST00000120041 2164 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Sec61a1P61620 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Sec61a1P61620 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC10.25□□□□□ -0.77
Sec61a1P61620 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Sec61a1P61620 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Sec61a1P61620 Nf1-202ENSMUST00000108251 9217 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Sec61a1P61620 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Sec61a1P61620 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Sec61a1P61620 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Sec61a1P61620 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Sec61a1P61620 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Sec61a1P61620 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC10.24□□□□□ -0.77
Sec61a1P61620 Kcnh3-201ENSMUST00000041415 3583 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Sec61a1P61620 Tpx2-206ENSMUST00000164120 4365 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Sec61a1P61620 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Sec61a1P61620 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC10.24□□□□□ -0.77
Sec61a1P61620 Gm6560-201ENSMUST00000198588 1591 ntBASIC10.24□□□□□ -0.77
Sec61a1P61620 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC10.24□□□□□ -0.77
Sec61a1P61620 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Sec61a1P61620 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Sec61a1P61620 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Sec61a1P61620 Gm11439-201ENSMUST00000118598 409 ntBASIC10.24□□□□□ -0.77
Sec61a1P61620 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Sec61a1P61620 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC10.24□□□□□ -0.77
Sec61a1P61620 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC10.24□□□□□ -0.77
Sec61a1P61620 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Sec61a1P61620 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
Sec61a1P61620 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC10.24□□□□□ -0.77
Sec61a1P61620 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Sec61a1P61620 Gm44262-201ENSMUST00000204969 372 ntBASIC10.24□□□□□ -0.77
Sec61a1P61620 Gm45186-201ENSMUST00000206874 478 ntBASIC10.24□□□□□ -0.77
Sec61a1P61620 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC10.24□□□□□ -0.77
Sec61a1P61620 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC10.24□□□□□ -0.77
Sec61a1P61620 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Sec61a1P61620 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Sec61a1P61620 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Sec61a1P61620 Stx1b-201ENSMUST00000106267 4536 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Sec61a1P61620 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Sec61a1P61620 Fam53a-203ENSMUST00000065162 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Sec61a1P61620 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Sec61a1P61620 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Sec61a1P61620 Lrtm2-204ENSMUST00000168793 3407 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Sec61a1P61620 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Sec61a1P61620 AI854703-201ENSMUST00000095938 3517 ntAPPRIS P1 TSL 2 BASIC10.24□□□□□ -0.77
Sec61a1P61620 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC10.24□□□□□ -0.77
Sec61a1P61620 AC108858.2-201ENSMUST00000228186 1425 ntBASIC10.24□□□□□ -0.77
Sec61a1P61620 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Sec61a1P61620 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Sec61a1P61620 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Sec61a1P61620 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Sec61a1P61620 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms