Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
NcanP55066 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
NcanP55066 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
NcanP55066 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
NcanP55066 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
NcanP55066 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
NcanP55066 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
NcanP55066 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
NcanP55066 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
NcanP55066 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
NcanP55066 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
NcanP55066 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
NcanP55066 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
NcanP55066 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
NcanP55066 Ccr6-205ENSMUST00000177568 1334 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
NcanP55066 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
NcanP55066 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
NcanP55066 Gm9133-201ENSMUST00000118289 540 ntBASIC12.21□□□□□ -0.45
NcanP55066 Gm1826-201ENSMUST00000118646 1162 ntBASIC12.21□□□□□ -0.45
NcanP55066 Gm15172-201ENSMUST00000118945 1046 ntBASIC12.21□□□□□ -0.45
NcanP55066 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
NcanP55066 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
NcanP55066 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
NcanP55066 Gm7572-201ENSMUST00000182616 766 ntBASIC12.21□□□□□ -0.45
NcanP55066 Gm38233-201ENSMUST00000194259 807 ntBASIC12.21□□□□□ -0.45
NcanP55066 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC12.21□□□□□ -0.45
NcanP55066 Mt1-203ENSMUST00000212291 633 ntTSL 2 BASIC12.21□□□□□ -0.45
NcanP55066 AC158986.2-201ENSMUST00000227487 618 ntBASIC12.21□□□□□ -0.45
NcanP55066 Olfr71-201ENSMUST00000055401 939 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
NcanP55066 Rps4l-ps-201ENSMUST00000059737 768 ntBASIC12.21□□□□□ -0.45
NcanP55066 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.45
NcanP55066 Gm9507-201ENSMUST00000095491 877 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
NcanP55066 AC159195.1-201ENSMUST00000225867 2086 ntBASIC12.21□□□□□ -0.45
NcanP55066 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
NcanP55066 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
NcanP55066 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
NcanP55066 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
NcanP55066 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
NcanP55066 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
NcanP55066 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
NcanP55066 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
NcanP55066 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.46
NcanP55066 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
NcanP55066 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
NcanP55066 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
NcanP55066 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
NcanP55066 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
NcanP55066 Gm45706-201ENSMUST00000213063 2136 ntBASIC12.2□□□□□ -0.46
NcanP55066 Pde4b-206ENSMUST00000106907 1374 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
NcanP55066 H2-M10.1-201ENSMUST00000025322 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
NcanP55066 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
NcanP55066 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
NcanP55066 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
NcanP55066 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
NcanP55066 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
NcanP55066 Rpl7a-ps12-201ENSMUST00000120384 794 ntBASIC12.2□□□□□ -0.46
NcanP55066 Hyal1-203ENSMUST00000123005 843 ntTSL 3 BASIC12.2□□□□□ -0.46
NcanP55066 Stard6-206ENSMUST00000174118 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
NcanP55066 Gm5976-201ENSMUST00000180794 996 ntBASIC12.2□□□□□ -0.46
NcanP55066 1110036E04Rik-201ENSMUST00000181151 777 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
NcanP55066 Cdk5-203ENSMUST00000198990 783 ntTSL 5 BASIC12.2□□□□□ -0.46
NcanP55066 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC12.2□□□□□ -0.46
NcanP55066 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC12.2□□□□□ -0.46
NcanP55066 Gm7727-201ENSMUST00000219830 671 ntBASIC12.2□□□□□ -0.46
NcanP55066 Klk1b24-201ENSMUST00000073713 878 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
NcanP55066 Iah1-201ENSMUST00000076813 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
NcanP55066 Taar7a-201ENSMUST00000078532 1077 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
NcanP55066 Klk1b21-201ENSMUST00000085455 871 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
NcanP55066 Taar7b-201ENSMUST00000092658 1077 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
NcanP55066 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
NcanP55066 Gm39117-201ENSMUST00000207692 1569 ntTSL 5 BASIC12.2□□□□□ -0.46
NcanP55066 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
NcanP55066 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
NcanP55066 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
NcanP55066 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC12.2□□□□□ -0.46
NcanP55066 Gm38089-201ENSMUST00000193585 1514 ntBASIC12.2□□□□□ -0.46
NcanP55066 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC12.2□□□□□ -0.46
NcanP55066 Brcc3-203ENSMUST00000118428 2093 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
NcanP55066 Gstm4-203ENSMUST00000178808 1462 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
NcanP55066 4930593A02Rik-201ENSMUST00000181694 1437 ntTSL 5 BASIC12.2□□□□□ -0.46
NcanP55066 Ap5s1-201ENSMUST00000089506 1432 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
NcanP55066 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NcanP55066 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NcanP55066 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
NcanP55066 Gm8522-201ENSMUST00000118416 1929 ntBASIC12.19□□□□□ -0.46
NcanP55066 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NcanP55066 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NcanP55066 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
NcanP55066 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
NcanP55066 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NcanP55066 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
NcanP55066 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NcanP55066 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NcanP55066 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
NcanP55066 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
NcanP55066 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC12.19□□□□□ -0.46
NcanP55066 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
NcanP55066 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
NcanP55066 Smim24-201ENSMUST00000105322 901 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NcanP55066 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms