Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Sox1P53783 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Sox1P53783 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox1P53783 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox1P53783 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox1P53783 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox1P53783 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox1P53783 Gm43167-201ENSMUST00000202001 1606 ntBASIC11.89□□□□□ -0.51
Sox1P53783 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox1P53783 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox1P53783 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox1P53783 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Sox1P53783 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox1P53783 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sox1P53783 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Sox1P53783 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Sox1P53783 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC11.88□□□□□ -0.51
Sox1P53783 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sox1P53783 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sox1P53783 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Sox1P53783 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sox1P53783 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sox1P53783 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC11.88□□□□□ -0.51
Sox1P53783 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sox1P53783 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Sox1P53783 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Sox1P53783 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Sox1P53783 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sox1P53783 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Sox1P53783 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sox1P53783 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sox1P53783 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Sox1P53783 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC11.88□□□□□ -0.51
Sox1P53783 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Sox1P53783 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Sox1P53783 Stard6-206ENSMUST00000174118 1185 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sox1P53783 Gm10807-201ENSMUST00000177134 795 ntBASIC11.88□□□□□ -0.51
Sox1P53783 Gm20865-201ENSMUST00000179095 856 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Sox1P53783 Gm26610-201ENSMUST00000181529 1024 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Sox1P53783 Gm37083-201ENSMUST00000195784 711 ntTSL 2 BASIC11.88□□□□□ -0.51
Sox1P53783 Gm42375-201ENSMUST00000206226 745 ntTSL 5 BASIC11.88□□□□□ -0.51
Sox1P53783 AC134248.1-201ENSMUST00000216113 1176 ntBASIC11.88□□□□□ -0.51
Sox1P53783 4933407L21Rik-201ENSMUST00000027426 1146 ntAPPRIS P5 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sox1P53783 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sox1P53783 Myoz2-201ENSMUST00000029761 1181 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sox1P53783 Clrn1-201ENSMUST00000051408 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sox1P53783 Rpl9-201ENSMUST00000057885 738 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sox1P53783 Gemin6-201ENSMUST00000069486 1134 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sox1P53783 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sox1P53783 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sox1P53783 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC11.88□□□□□ -0.51
Sox1P53783 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sox1P53783 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC11.88□□□□□ -0.51
Sox1P53783 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sox1P53783 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC11.88□□□□□ -0.51
Sox1P53783 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Sox1P53783 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sox1P53783 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sox1P53783 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Sox1P53783 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Sox1P53783 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sox1P53783 Ppp2r2cos-201ENSMUST00000152862 1491 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Sox1P53783 Fscn3-201ENSMUST00000031719 1902 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sox1P53783 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sox1P53783 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sox1P53783 Tbp-203ENSMUST00000118001 1652 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Sox1P53783 Pou3f4-201ENSMUST00000078229 2928 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Sox1P53783 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Sox1P53783 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Sox1P53783 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Sox1P53783 Ncmap-201ENSMUST00000064481 1448 ntAPPRIS P1 TSL 3 BASIC11.87□□□□□ -0.51
Sox1P53783 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC11.87□□□□□ -0.51
Sox1P53783 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sox1P53783 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Sox1P53783 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sox1P53783 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sox1P53783 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Sox1P53783 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sox1P53783 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sox1P53783 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sox1P53783 Gm1826-201ENSMUST00000118646 1162 ntBASIC11.87□□□□□ -0.51
Sox1P53783 1700017J07Rik-201ENSMUST00000140241 473 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Sox1P53783 Gm12962-202ENSMUST00000144212 691 ntTSL 2 BASIC11.87□□□□□ -0.51
Sox1P53783 Tpi1-203ENSMUST00000149610 802 ntTSL 2 BASIC11.87□□□□□ -0.51
Sox1P53783 Gm22763-201ENSMUST00000158374 107 ntBASIC11.87□□□□□ -0.51
Sox1P53783 Gm16228-201ENSMUST00000162286 809 ntBASIC11.87□□□□□ -0.51
Sox1P53783 AU015836-205ENSMUST00000163458 911 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Sox1P53783 Tex33-202ENSMUST00000165170 1072 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sox1P53783 Gm5976-201ENSMUST00000180794 996 ntBASIC11.87□□□□□ -0.51
Sox1P53783 Gm27440-201ENSMUST00000184785 107 ntBASIC11.87□□□□□ -0.51
Sox1P53783 Ighv5-8-202ENSMUST00000191967 337 ntBASIC11.87□□□□□ -0.51
Sox1P53783 Gm9369-201ENSMUST00000196009 733 ntBASIC11.87□□□□□ -0.51
Sox1P53783 Gm43106-201ENSMUST00000199485 637 ntBASIC11.87□□□□□ -0.51
Sox1P53783 Ctrl-201ENSMUST00000034368 879 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sox1P53783 Rpl22l1-201ENSMUST00000043867 552 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sox1P53783 Tex33-201ENSMUST00000074380 1147 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sox1P53783 Gm17541-201ENSMUST00000080062 525 ntBASIC11.87□□□□□ -0.51
Sox1P53783 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sox1P53783 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sox1P53783 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms