Protein–RNA interactions for Protein: P39689

Cdkn1a, Cyclin-dependent kinase inhibitor 1, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn1aP39689 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Cdkn1aP39689 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC9.59□□□□□ -0.87
Cdkn1aP39689 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Cdkn1aP39689 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
Cdkn1aP39689 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Cdkn1aP39689 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Cdkn1aP39689 Gm6430-201ENSMUST00000054664 1248 ntBASIC9.59□□□□□ -0.87
Cdkn1aP39689 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
Cdkn1aP39689 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Cdkn1aP39689 Gm5879-201ENSMUST00000089501 1209 ntBASIC9.59□□□□□ -0.87
Cdkn1aP39689 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Cdkn1aP39689 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC9.59□□□□□ -0.87
Cdkn1aP39689 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
Cdkn1aP39689 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC9.59□□□□□ -0.87
Cdkn1aP39689 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC9.59□□□□□ -0.87
Cdkn1aP39689 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
Cdkn1aP39689 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Cdkn1aP39689 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Cdkn1aP39689 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Cdkn1aP39689 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Cdkn1aP39689 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Cdkn1aP39689 Gm43365-201ENSMUST00000196522 2106 ntBASIC9.59□□□□□ -0.87
Cdkn1aP39689 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Cdkn1aP39689 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Cdkn1aP39689 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Cdkn1aP39689 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Cdkn1aP39689 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Cdkn1aP39689 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Cdkn1aP39689 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Cdkn1aP39689 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Cdkn1aP39689 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Cdkn1aP39689 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.88
Cdkn1aP39689 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC9.59□□□□□ -0.88
Cdkn1aP39689 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC9.58□□□□□ -0.88
Cdkn1aP39689 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC9.58□□□□□ -0.88
Cdkn1aP39689 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cdkn1aP39689 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Cdkn1aP39689 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cdkn1aP39689 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cdkn1aP39689 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Cdkn1aP39689 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cdkn1aP39689 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cdkn1aP39689 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cdkn1aP39689 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC9.58□□□□□ -0.88
Cdkn1aP39689 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cdkn1aP39689 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cdkn1aP39689 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC9.58□□□□□ -0.88
Cdkn1aP39689 Gm16071-201ENSMUST00000119589 793 ntBASIC9.58□□□□□ -0.88
Cdkn1aP39689 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Cdkn1aP39689 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC9.58□□□□□ -0.88
Cdkn1aP39689 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cdkn1aP39689 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Cdkn1aP39689 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Cdkn1aP39689 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Cdkn1aP39689 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC9.58□□□□□ -0.88
Cdkn1aP39689 Gm17826-201ENSMUST00000189720 798 ntBASIC9.58□□□□□ -0.88
Cdkn1aP39689 Gm3551-201ENSMUST00000190750 664 ntBASIC9.58□□□□□ -0.88
Cdkn1aP39689 Gm7504-201ENSMUST00000201449 424 ntBASIC9.58□□□□□ -0.88
Cdkn1aP39689 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Cdkn1aP39689 Gm44421-201ENSMUST00000205064 1221 ntBASIC9.58□□□□□ -0.88
Cdkn1aP39689 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Cdkn1aP39689 AC154257.1-202ENSMUST00000224729 843 ntBASIC9.58□□□□□ -0.88
Cdkn1aP39689 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cdkn1aP39689 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cdkn1aP39689 Snora73b-201ENSMUST00000083419 205 ntBASIC9.58□□□□□ -0.88
Cdkn1aP39689 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cdkn1aP39689 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cdkn1aP39689 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC9.58□□□□□ -0.88
Cdkn1aP39689 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Cdkn1aP39689 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cdkn1aP39689 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Cdkn1aP39689 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Cdkn1aP39689 Gm13347-201ENSMUST00000120298 1353 ntBASIC9.58□□□□□ -0.88
Cdkn1aP39689 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC9.58□□□□□ -0.88
Cdkn1aP39689 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cdkn1aP39689 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cdkn1aP39689 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Cdkn1aP39689 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC9.58□□□□□ -0.88
Cdkn1aP39689 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC9.58□□□□□ -0.88
Cdkn1aP39689 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Cdkn1aP39689 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC9.58□□□□□ -0.88
Cdkn1aP39689 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cdkn1aP39689 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Cdkn1aP39689 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cdkn1aP39689 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Cdkn1aP39689 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC9.58□□□□□ -0.88
Cdkn1aP39689 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Cdkn1aP39689 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC9.57□□□□□ -0.88
Cdkn1aP39689 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Cdkn1aP39689 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Cdkn1aP39689 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Cdkn1aP39689 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
Cdkn1aP39689 Gm43773-201ENSMUST00000198548 2162 ntBASIC9.57□□□□□ -0.88
Cdkn1aP39689 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
Cdkn1aP39689 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC9.57□□□□□ -0.88
Cdkn1aP39689 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Cdkn1aP39689 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Cdkn1aP39689 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Cdkn1aP39689 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Cdkn1aP39689 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms