Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Mir453-201ENSMUST00000104732 82 ntBASIC10.23□□□□□ -0.77
Ccl3P10855 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC10.23□□□□□ -0.77
Ccl3P10855 Oprl1-204ENSMUST00000108767 1248 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Ccl3P10855 Fam3a-204ENSMUST00000114141 1243 ntTSL 5 BASIC10.23□□□□□ -0.77
Ccl3P10855 Gm15528-201ENSMUST00000117821 864 ntBASIC10.23□□□□□ -0.77
Ccl3P10855 Gm15374-201ENSMUST00000119313 844 ntBASIC10.23□□□□□ -0.77
Ccl3P10855 Gm11354-201ENSMUST00000121974 422 ntBASIC10.23□□□□□ -0.77
Ccl3P10855 Rbm3os-201ENSMUST00000124018 839 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Ccl3P10855 Gm11884-201ENSMUST00000131639 641 ntTSL 5 BASIC10.23□□□□□ -0.77
Ccl3P10855 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Ccl3P10855 Gm25830-201ENSMUST00000158923 132 ntBASIC10.23□□□□□ -0.77
Ccl3P10855 Gm15524-201ENSMUST00000159874 463 ntTSL 3 BASIC10.23□□□□□ -0.77
Ccl3P10855 Gas5-224ENSMUST00000162558 502 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Ccl3P10855 Gm21778-201ENSMUST00000178779 471 ntBASIC10.23□□□□□ -0.77
Ccl3P10855 Gm7719-201ENSMUST00000182374 975 ntBASIC10.23□□□□□ -0.77
Ccl3P10855 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Ccl3P10855 Gm28529-201ENSMUST00000186159 387 ntTSL 3 BASIC10.23□□□□□ -0.77
Ccl3P10855 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC10.23□□□□□ -0.77
Ccl3P10855 Gm5700-201ENSMUST00000191483 989 ntBASIC10.23□□□□□ -0.77
Ccl3P10855 Use1-201ENSMUST00000019169 854 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Ccl3P10855 C230057A21Rik-202ENSMUST00000195781 600 ntTSL 3 BASIC10.23□□□□□ -0.77
Ccl3P10855 4930543N07Rik-202ENSMUST00000209503 1117 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Ccl3P10855 Adipoq-201ENSMUST00000023593 1292 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Ccl3P10855 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Ccl3P10855 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC10.23□□□□□ -0.77
Ccl3P10855 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Ccl3P10855 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Ccl3P10855 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Ccl3P10855 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Ccl3P10855 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Ccl3P10855 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC10.23□□□□□ -0.77
Ccl3P10855 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Ccl3P10855 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Ccl3P10855 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Ccl3P10855 Hddc3-201ENSMUST00000032747 1510 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Ccl3P10855 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Ccl3P10855 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Ccl3P10855 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Ccl3P10855 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Ccl3P10855 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Ccl3P10855 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Ccl3P10855 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Ccl3P10855 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Ccl3P10855 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Ccl3P10855 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Ccl3P10855 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC10.22□□□□□ -0.77
Ccl3P10855 Gm5740-201ENSMUST00000211003 1857 ntBASIC10.22□□□□□ -0.77
Ccl3P10855 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC10.22□□□□□ -0.77
Ccl3P10855 Gm11619-201ENSMUST00000117474 237 ntBASIC10.22□□□□□ -0.77
Ccl3P10855 Gm12218-201ENSMUST00000117666 399 ntBASIC10.22□□□□□ -0.77
Ccl3P10855 Gm11979-201ENSMUST00000119629 743 ntBASIC10.22□□□□□ -0.77
Ccl3P10855 Gm14213-201ENSMUST00000119778 768 ntBASIC10.22□□□□□ -0.77
Ccl3P10855 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC10.22□□□□□ -0.77
Ccl3P10855 Gm14993-201ENSMUST00000121180 164 ntBASIC10.22□□□□□ -0.77
Ccl3P10855 Mir1905-201ENSMUST00000122779 82 ntBASIC10.22□□□□□ -0.77
Ccl3P10855 Gm22846-201ENSMUST00000157706 270 ntBASIC10.22□□□□□ -0.77
Ccl3P10855 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Ccl3P10855 1700081H04Rik-201ENSMUST00000190550 1128 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Ccl3P10855 Gm38314-201ENSMUST00000195709 625 ntBASIC10.22□□□□□ -0.77
Ccl3P10855 Gm45079-201ENSMUST00000205627 461 ntTSL 3 BASIC10.22□□□□□ -0.77
Ccl3P10855 Gm5599-201ENSMUST00000209602 788 ntBASIC10.22□□□□□ -0.77
Ccl3P10855 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC10.22□□□□□ -0.77
Ccl3P10855 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC10.22□□□□□ -0.77
Ccl3P10855 AC154305.2-201ENSMUST00000225813 901 ntBASIC10.22□□□□□ -0.77
Ccl3P10855 Tspo2-201ENSMUST00000024794 956 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Ccl3P10855 Cxcl1-201ENSMUST00000031327 953 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Ccl3P10855 Olfr314-201ENSMUST00000076393 1131 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
Ccl3P10855 Olfr1230-201ENSMUST00000099787 918 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
Ccl3P10855 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Ccl3P10855 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Ccl3P10855 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Ccl3P10855 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Ccl3P10855 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Ccl3P10855 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Ccl3P10855 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Ccl3P10855 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Ccl3P10855 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Ccl3P10855 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Ccl3P10855 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Ccl3P10855 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Ccl3P10855 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
Ccl3P10855 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
Ccl3P10855 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC10.21□□□□□ -0.77
Ccl3P10855 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Ccl3P10855 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Ccl3P10855 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Ccl3P10855 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Ccl3P10855 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC10.21□□□□□ -0.77
Ccl3P10855 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Ccl3P10855 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Ccl3P10855 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Ccl3P10855 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Ccl3P10855 AC165351.1-201ENSMUST00000219078 2020 ntBASIC10.21□□□□□ -0.77
Ccl3P10855 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Ccl3P10855 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Ccl3P10855 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Ccl3P10855 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Ccl3P10855 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Ccl3P10855 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Ccl3P10855 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC10.21□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 61.6 ms