Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC13.76□□□□□ -0.21
Smarce1O54941 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Smarce1O54941 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Smarce1O54941 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
Smarce1O54941 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Smarce1O54941 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC13.76□□□□□ -0.21
Smarce1O54941 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC13.76□□□□□ -0.21
Smarce1O54941 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Smarce1O54941 Gm17827-201ENSMUST00000211825 742 ntBASIC13.76□□□□□ -0.21
Smarce1O54941 AC122371.3-201ENSMUST00000223402 1061 ntBASIC13.76□□□□□ -0.21
Smarce1O54941 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smarce1O54941 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Smarce1O54941 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smarce1O54941 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smarce1O54941 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC13.76□□□□□ -0.21
Smarce1O54941 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Smarce1O54941 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Smarce1O54941 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smarce1O54941 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Smarce1O54941 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smarce1O54941 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC13.76□□□□□ -0.21
Smarce1O54941 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smarce1O54941 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Smarce1O54941 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
Smarce1O54941 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC13.76□□□□□ -0.21
Smarce1O54941 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smarce1O54941 Pck2-207ENSMUST00000226519 4625 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Smarce1O54941 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Smarce1O54941 AC167565.1-201ENSMUST00000226980 1833 ntBASIC13.76□□□□□ -0.21
Smarce1O54941 Erich3-203ENSMUST00000189969 3460 ntBASIC13.76□□□□□ -0.21
Smarce1O54941 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smarce1O54941 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Smarce1O54941 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Smarce1O54941 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smarce1O54941 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smarce1O54941 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Smarce1O54941 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smarce1O54941 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Smarce1O54941 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC13.75□□□□□ -0.21
Smarce1O54941 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Smarce1O54941 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smarce1O54941 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Smarce1O54941 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Smarce1O54941 Ptpn23-201ENSMUST00000040021 5346 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Smarce1O54941 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smarce1O54941 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC13.75□□□□□ -0.21
Smarce1O54941 Ebf2-203ENSMUST00000176161 5204 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smarce1O54941 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC13.75□□□□□ -0.21
Smarce1O54941 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smarce1O54941 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smarce1O54941 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC13.75□□□□□ -0.21
Smarce1O54941 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Smarce1O54941 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC13.75□□□□□ -0.21
Smarce1O54941 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Smarce1O54941 Gm43184-201ENSMUST00000197247 542 ntBASIC13.75□□□□□ -0.21
Smarce1O54941 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Smarce1O54941 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC13.75□□□□□ -0.21
Smarce1O54941 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC13.75□□□□□ -0.21
Smarce1O54941 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC13.75□□□□□ -0.21
Smarce1O54941 AC159205.5-202ENSMUST00000224849 386 ntBASIC13.75□□□□□ -0.21
Smarce1O54941 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smarce1O54941 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smarce1O54941 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC13.75□□□□□ -0.21
Smarce1O54941 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Smarce1O54941 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smarce1O54941 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Smarce1O54941 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Smarce1O54941 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Smarce1O54941 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
Smarce1O54941 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smarce1O54941 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smarce1O54941 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smarce1O54941 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smarce1O54941 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smarce1O54941 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC13.75□□□□□ -0.21
Smarce1O54941 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smarce1O54941 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC13.75□□□□□ -0.21
Smarce1O54941 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smarce1O54941 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smarce1O54941 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Smarce1O54941 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smarce1O54941 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smarce1O54941 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
Smarce1O54941 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smarce1O54941 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smarce1O54941 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smarce1O54941 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smarce1O54941 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Smarce1O54941 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Smarce1O54941 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC13.74□□□□□ -0.21
Smarce1O54941 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smarce1O54941 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smarce1O54941 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smarce1O54941 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC13.74□□□□□ -0.21
Smarce1O54941 Gm15276-201ENSMUST00000145953 498 ntBASIC13.74□□□□□ -0.21
Smarce1O54941 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC13.74□□□□□ -0.21
Smarce1O54941 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Smarce1O54941 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC13.74□□□□□ -0.21
Smarce1O54941 Gm34767-201ENSMUST00000191813 1062 ntBASIC13.74□□□□□ -0.21
Smarce1O54941 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC13.74□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms