Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Shisa8J3QNX5 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Shisa8J3QNX5 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Shisa8J3QNX5 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Shisa8J3QNX5 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Shisa8J3QNX5 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Shisa8J3QNX5 Thbs4-201ENSMUST00000022213 3198 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Shisa8J3QNX5 Gm7841-201ENSMUST00000122108 1629 ntBASIC10.55□□□□□ -0.72
Shisa8J3QNX5 AC167669.2-201ENSMUST00000224417 1620 ntBASIC10.55□□□□□ -0.72
Shisa8J3QNX5 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Shisa8J3QNX5 Rsrc2-202ENSMUST00000057795 2270 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Shisa8J3QNX5 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Shisa8J3QNX5 Gm3756-201ENSMUST00000169182 1355 ntBASIC10.55□□□□□ -0.72
Shisa8J3QNX5 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Shisa8J3QNX5 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Shisa8J3QNX5 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Shisa8J3QNX5 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Shisa8J3QNX5 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Shisa8J3QNX5 Gm44826-201ENSMUST00000207648 2332 ntBASIC10.55□□□□□ -0.72
Shisa8J3QNX5 Parvg-207ENSMUST00000163667 2700 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Shisa8J3QNX5 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Shisa8J3QNX5 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Shisa8J3QNX5 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Shisa8J3QNX5 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Shisa8J3QNX5 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Shisa8J3QNX5 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Shisa8J3QNX5 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC10.55□□□□□ -0.72
Shisa8J3QNX5 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC10.55□□□□□ -0.72
Shisa8J3QNX5 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC10.55□□□□□ -0.72
Shisa8J3QNX5 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Shisa8J3QNX5 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC10.55□□□□□ -0.72
Shisa8J3QNX5 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC10.55□□□□□ -0.72
Shisa8J3QNX5 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Shisa8J3QNX5 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC10.55□□□□□ -0.72
Shisa8J3QNX5 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC10.55□□□□□ -0.72
Shisa8J3QNX5 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC10.55□□□□□ -0.72
Shisa8J3QNX5 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC10.55□□□□□ -0.72
Shisa8J3QNX5 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Shisa8J3QNX5 Gm37008-201ENSMUST00000195712 319 ntBASIC10.55□□□□□ -0.72
Shisa8J3QNX5 Gm6266-201ENSMUST00000203844 806 ntBASIC10.55□□□□□ -0.72
Shisa8J3QNX5 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC10.55□□□□□ -0.72
Shisa8J3QNX5 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC10.55□□□□□ -0.72
Shisa8J3QNX5 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC10.55□□□□□ -0.72
Shisa8J3QNX5 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Shisa8J3QNX5 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Shisa8J3QNX5 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Shisa8J3QNX5 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Shisa8J3QNX5 Anks1b-218ENSMUST00000182595 3715 ntTSL 5 BASIC10.55□□□□□ -0.72
Shisa8J3QNX5 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Shisa8J3QNX5 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Shisa8J3QNX5 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC10.55□□□□□ -0.72
Shisa8J3QNX5 Ntrk3-205ENSMUST00000193002 2678 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Shisa8J3QNX5 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Shisa8J3QNX5 Usp44-202ENSMUST00000216224 2449 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Shisa8J3QNX5 Krba1-201ENSMUST00000031815 3685 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Shisa8J3QNX5 Rnf41-201ENSMUST00000096386 3144 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Shisa8J3QNX5 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Shisa8J3QNX5 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Shisa8J3QNX5 Slc4a9-201ENSMUST00000074298 2714 ntAPPRIS P3 TSL 5 BASIC10.55□□□□□ -0.72
Shisa8J3QNX5 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Shisa8J3QNX5 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Shisa8J3QNX5 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Shisa8J3QNX5 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Shisa8J3QNX5 Arhgap24-202ENSMUST00000073302 3151 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Shisa8J3QNX5 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Shisa8J3QNX5 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Shisa8J3QNX5 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC10.54□□□□□ -0.72
Shisa8J3QNX5 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Shisa8J3QNX5 Suclg2-201ENSMUST00000079847 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Shisa8J3QNX5 Ppat-202ENSMUST00000140076 3981 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Shisa8J3QNX5 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Shisa8J3QNX5 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC10.54□□□□□ -0.72
Shisa8J3QNX5 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Shisa8J3QNX5 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC10.54□□□□□ -0.72
Shisa8J3QNX5 Cd6-203ENSMUST00000080292 3032 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Shisa8J3QNX5 Mms19-201ENSMUST00000026168 3162 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Shisa8J3QNX5 Gfra2-201ENSMUST00000022699 3472 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Shisa8J3QNX5 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Shisa8J3QNX5 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Shisa8J3QNX5 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Shisa8J3QNX5 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Shisa8J3QNX5 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Shisa8J3QNX5 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC10.54□□□□□ -0.72
Shisa8J3QNX5 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC10.54□□□□□ -0.72
Shisa8J3QNX5 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC10.54□□□□□ -0.72
Shisa8J3QNX5 AC154252.2-201ENSMUST00000223593 767 ntBASIC10.54□□□□□ -0.72
Shisa8J3QNX5 Oas1d-201ENSMUST00000044224 2021 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Shisa8J3QNX5 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Shisa8J3QNX5 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Shisa8J3QNX5 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Shisa8J3QNX5 Tnfaip8l3-201ENSMUST00000098760 4403 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Shisa8J3QNX5 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Shisa8J3QNX5 Vwa5b2-207ENSMUST00000159780 4042 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Shisa8J3QNX5 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Shisa8J3QNX5 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Shisa8J3QNX5 Tesk2-201ENSMUST00000045542 3033 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Shisa8J3QNX5 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Shisa8J3QNX5 Tnpo3-201ENSMUST00000012679 4251 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Shisa8J3QNX5 Gm10152-201ENSMUST00000193475 1344 ntBASIC10.54□□□□□ -0.72
Shisa8J3QNX5 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms