Protein–RNA interactions for Protein: F6SEU4

Syngap1, Ras/Rap GTPase-activating protein SynGAP, mousemouse

Predictions only

Length 1,340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syngap1F6SEU4 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Syngap1F6SEU4 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Syngap1F6SEU4 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Syngap1F6SEU4 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Syngap1F6SEU4 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC13.1□□□□□ -0.31
Syngap1F6SEU4 Gm37105-201ENSMUST00000192251 2085 ntBASIC13.1□□□□□ -0.31
Syngap1F6SEU4 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Syngap1F6SEU4 n-R5s64-201ENSMUST00000102019 119 ntBASIC13.1□□□□□ -0.31
Syngap1F6SEU4 Gm12579-201ENSMUST00000118040 783 ntBASIC13.1□□□□□ -0.31
Syngap1F6SEU4 Gm8731-201ENSMUST00000118088 412 ntBASIC13.1□□□□□ -0.31
Syngap1F6SEU4 Spaca9-202ENSMUST00000124840 699 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Syngap1F6SEU4 Gm24248-201ENSMUST00000157321 322 ntBASIC13.1□□□□□ -0.31
Syngap1F6SEU4 Gm44270-201ENSMUST00000203084 1234 ntBASIC13.1□□□□□ -0.31
Syngap1F6SEU4 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC13.1□□□□□ -0.31
Syngap1F6SEU4 Cma1-202ENSMUST00000226280 1090 ntAPPRIS ALT2 BASIC13.1□□□□□ -0.31
Syngap1F6SEU4 AC142266.1-201ENSMUST00000228107 415 ntBASIC13.1□□□□□ -0.31
Syngap1F6SEU4 Cma1-201ENSMUST00000022834 1074 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Syngap1F6SEU4 Mcpt4-201ENSMUST00000043249 1108 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Syngap1F6SEU4 Gm5537-201ENSMUST00000091117 1252 ntBASIC13.1□□□□□ -0.31
Syngap1F6SEU4 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Syngap1F6SEU4 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Syngap1F6SEU4 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
Syngap1F6SEU4 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Syngap1F6SEU4 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Syngap1F6SEU4 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Syngap1F6SEU4 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Syngap1F6SEU4 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Syngap1F6SEU4 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Syngap1F6SEU4 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Syngap1F6SEU4 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Syngap1F6SEU4 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Syngap1F6SEU4 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Syngap1F6SEU4 AC156031.2-201ENSMUST00000213107 3310 ntBASIC13.09□□□□□ -0.31
Syngap1F6SEU4 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Syngap1F6SEU4 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC13.09□□□□□ -0.31
Syngap1F6SEU4 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Syngap1F6SEU4 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Syngap1F6SEU4 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC13.09□□□□□ -0.31
Syngap1F6SEU4 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC13.09□□□□□ -0.31
Syngap1F6SEU4 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Syngap1F6SEU4 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Syngap1F6SEU4 Gm22920-201ENSMUST00000102175 109 ntBASIC13.09□□□□□ -0.31
Syngap1F6SEU4 Gm15004-201ENSMUST00000119192 630 ntBASIC13.09□□□□□ -0.31
Syngap1F6SEU4 Gm14942-201ENSMUST00000119642 336 ntBASIC13.09□□□□□ -0.31
Syngap1F6SEU4 Gm12069-201ENSMUST00000145127 806 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Syngap1F6SEU4 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC13.09□□□□□ -0.31
Syngap1F6SEU4 Gm45613-201ENSMUST00000210718 443 ntTSL 3 BASIC13.09□□□□□ -0.31
Syngap1F6SEU4 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Syngap1F6SEU4 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Syngap1F6SEU4 Gm7537-201ENSMUST00000221660 1414 ntBASIC13.09□□□□□ -0.31
Syngap1F6SEU4 AC130477.1-201ENSMUST00000226982 420 ntBASIC13.09□□□□□ -0.31
Syngap1F6SEU4 C8g-202ENSMUST00000040042 1150 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Syngap1F6SEU4 H2-Aa-201ENSMUST00000040655 1132 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Syngap1F6SEU4 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Syngap1F6SEU4 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC13.09□□□□□ -0.31
Syngap1F6SEU4 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Syngap1F6SEU4 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Syngap1F6SEU4 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
Syngap1F6SEU4 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
Syngap1F6SEU4 Gm43051-201ENSMUST00000201096 2678 ntBASIC13.09□□□□□ -0.31
Syngap1F6SEU4 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Syngap1F6SEU4 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Syngap1F6SEU4 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.31
Syngap1F6SEU4 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Syngap1F6SEU4 Triml2-201ENSMUST00000163869 1467 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.31
Syngap1F6SEU4 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Syngap1F6SEU4 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Syngap1F6SEU4 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Syngap1F6SEU4 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Syngap1F6SEU4 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Syngap1F6SEU4 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Syngap1F6SEU4 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC13.08□□□□□ -0.32
Syngap1F6SEU4 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Syngap1F6SEU4 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC13.08□□□□□ -0.32
Syngap1F6SEU4 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Syngap1F6SEU4 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Syngap1F6SEU4 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Syngap1F6SEU4 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC13.08□□□□□ -0.32
Syngap1F6SEU4 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Syngap1F6SEU4 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC13.08□□□□□ -0.32
Syngap1F6SEU4 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Syngap1F6SEU4 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Syngap1F6SEU4 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Syngap1F6SEU4 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Syngap1F6SEU4 Gm13910-201ENSMUST00000121752 1428 ntBASIC13.08□□□□□ -0.32
Syngap1F6SEU4 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Syngap1F6SEU4 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Syngap1F6SEU4 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC13.08□□□□□ -0.32
Syngap1F6SEU4 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC13.08□□□□□ -0.32
Syngap1F6SEU4 Gm14193-201ENSMUST00000105067 153 ntBASIC13.08□□□□□ -0.32
Syngap1F6SEU4 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Syngap1F6SEU4 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Syngap1F6SEU4 Gm14807-201ENSMUST00000116640 983 ntBASIC13.08□□□□□ -0.32
Syngap1F6SEU4 Ice2-202ENSMUST00000117246 1201 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Syngap1F6SEU4 Gm15207-201ENSMUST00000119259 442 ntBASIC13.08□□□□□ -0.32
Syngap1F6SEU4 Gm13204-201ENSMUST00000120110 821 ntBASIC13.08□□□□□ -0.32
Syngap1F6SEU4 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC13.08□□□□□ -0.32
Syngap1F6SEU4 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Syngap1F6SEU4 Gm25226-201ENSMUST00000158198 123 ntBASIC13.08□□□□□ -0.32
Syngap1F6SEU4 Gm16167-201ENSMUST00000160428 1065 ntBASIC13.08□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms