Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
H2afb2S4R1M3 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
H2afb2S4R1M3 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
H2afb2S4R1M3 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
H2afb2S4R1M3 Erich3-203ENSMUST00000189969 3460 ntBASIC11.6□□□□□ -0.55
H2afb2S4R1M3 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
H2afb2S4R1M3 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
H2afb2S4R1M3 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
H2afb2S4R1M3 Gm14150-201ENSMUST00000122404 1354 ntBASIC11.6□□□□□ -0.55
H2afb2S4R1M3 Gm7964-201ENSMUST00000051522 1378 ntBASIC11.6□□□□□ -0.55
H2afb2S4R1M3 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
H2afb2S4R1M3 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC11.6□□□□□ -0.55
H2afb2S4R1M3 Gm12266-201ENSMUST00000120311 962 ntBASIC11.6□□□□□ -0.55
H2afb2S4R1M3 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
H2afb2S4R1M3 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
H2afb2S4R1M3 H2-Q3-201ENSMUST00000172583 608 ntBASIC11.6□□□□□ -0.55
H2afb2S4R1M3 Gm2260-201ENSMUST00000184965 657 ntBASIC11.6□□□□□ -0.55
H2afb2S4R1M3 Gstp-ps-201ENSMUST00000195526 631 ntBASIC11.6□□□□□ -0.55
H2afb2S4R1M3 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC11.6□□□□□ -0.55
H2afb2S4R1M3 Gm45113-201ENSMUST00000207518 165 ntBASIC11.6□□□□□ -0.55
H2afb2S4R1M3 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
H2afb2S4R1M3 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
H2afb2S4R1M3 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
H2afb2S4R1M3 Gm10254-201ENSMUST00000052888 867 ntBASIC11.6□□□□□ -0.55
H2afb2S4R1M3 Gm10288-201ENSMUST00000084614 537 ntBASIC11.6□□□□□ -0.55
H2afb2S4R1M3 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
H2afb2S4R1M3 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
H2afb2S4R1M3 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
H2afb2S4R1M3 AC122811.1-201ENSMUST00000222257 2921 ntBASIC11.6□□□□□ -0.55
H2afb2S4R1M3 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
H2afb2S4R1M3 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
H2afb2S4R1M3 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
H2afb2S4R1M3 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
H2afb2S4R1M3 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
H2afb2S4R1M3 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
H2afb2S4R1M3 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
H2afb2S4R1M3 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
H2afb2S4R1M3 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
H2afb2S4R1M3 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
H2afb2S4R1M3 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
H2afb2S4R1M3 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
H2afb2S4R1M3 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
H2afb2S4R1M3 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
H2afb2S4R1M3 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
H2afb2S4R1M3 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
H2afb2S4R1M3 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
H2afb2S4R1M3 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC11.59□□□□□ -0.55
H2afb2S4R1M3 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
H2afb2S4R1M3 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
H2afb2S4R1M3 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
H2afb2S4R1M3 Gm2128-201ENSMUST00000108009 2560 ntBASIC11.59□□□□□ -0.55
H2afb2S4R1M3 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
H2afb2S4R1M3 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
H2afb2S4R1M3 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
H2afb2S4R1M3 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
H2afb2S4R1M3 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
H2afb2S4R1M3 Gm14071-201ENSMUST00000117817 509 ntBASIC11.59□□□□□ -0.55
H2afb2S4R1M3 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC11.59□□□□□ -0.55
H2afb2S4R1M3 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC11.59□□□□□ -0.55
H2afb2S4R1M3 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC11.59□□□□□ -0.55
H2afb2S4R1M3 Gm17040-202ENSMUST00000170597 889 ntBASIC11.59□□□□□ -0.55
H2afb2S4R1M3 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
H2afb2S4R1M3 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC11.59□□□□□ -0.55
H2afb2S4R1M3 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC11.59□□□□□ -0.55
H2afb2S4R1M3 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
H2afb2S4R1M3 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC11.59□□□□□ -0.55
H2afb2S4R1M3 Gm6867-201ENSMUST00000219165 425 ntBASIC11.59□□□□□ -0.55
H2afb2S4R1M3 Gm9176-201ENSMUST00000219955 1120 ntBASIC11.59□□□□□ -0.55
H2afb2S4R1M3 CT030182.1-201ENSMUST00000225935 533 ntBASIC11.59□□□□□ -0.55
H2afb2S4R1M3 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
H2afb2S4R1M3 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC11.59□□□□□ -0.55
H2afb2S4R1M3 Gm21811-201ENSMUST00000096485 930 ntBASIC11.59□□□□□ -0.55
H2afb2S4R1M3 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
H2afb2S4R1M3 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
H2afb2S4R1M3 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
H2afb2S4R1M3 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC11.59□□□□□ -0.55
H2afb2S4R1M3 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
H2afb2S4R1M3 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
H2afb2S4R1M3 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
H2afb2S4R1M3 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
H2afb2S4R1M3 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
H2afb2S4R1M3 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
H2afb2S4R1M3 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
H2afb2S4R1M3 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC11.59□□□□□ -0.55
H2afb2S4R1M3 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
H2afb2S4R1M3 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC11.59□□□□□ -0.55
H2afb2S4R1M3 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
H2afb2S4R1M3 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
H2afb2S4R1M3 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC11.59□□□□□ -0.55
H2afb2S4R1M3 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
H2afb2S4R1M3 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
H2afb2S4R1M3 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.55
H2afb2S4R1M3 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.55
H2afb2S4R1M3 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
H2afb2S4R1M3 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.55
H2afb2S4R1M3 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
H2afb2S4R1M3 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
H2afb2S4R1M3 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
H2afb2S4R1M3 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
H2afb2S4R1M3 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms