Protein–RNA interactions for Protein: Q9CWU5

Khdc3, KH domain-containing protein 3, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc3Q9CWU5 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Khdc3Q9CWU5 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Khdc3Q9CWU5 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Khdc3Q9CWU5 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Khdc3Q9CWU5 Gm12380-201ENSMUST00000119012 544 ntBASIC11.17□□□□□ -0.62
Khdc3Q9CWU5 Gm11960-201ENSMUST00000122068 925 ntBASIC11.17□□□□□ -0.62
Khdc3Q9CWU5 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Khdc3Q9CWU5 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Khdc3Q9CWU5 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
Khdc3Q9CWU5 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC11.17□□□□□ -0.62
Khdc3Q9CWU5 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC11.17□□□□□ -0.62
Khdc3Q9CWU5 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Khdc3Q9CWU5 Mir7677-201ENSMUST00000184226 67 ntBASIC11.17□□□□□ -0.62
Khdc3Q9CWU5 Gm28686-201ENSMUST00000187404 609 ntBASIC11.17□□□□□ -0.62
Khdc3Q9CWU5 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC11.17□□□□□ -0.62
Khdc3Q9CWU5 Gm7293-201ENSMUST00000216682 1007 ntBASIC11.17□□□□□ -0.62
Khdc3Q9CWU5 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC11.17□□□□□ -0.62
Khdc3Q9CWU5 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC11.17□□□□□ -0.62
Khdc3Q9CWU5 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Khdc3Q9CWU5 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Khdc3Q9CWU5 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Khdc3Q9CWU5 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Khdc3Q9CWU5 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Khdc3Q9CWU5 Gm9072-201ENSMUST00000218390 1514 ntBASIC11.17□□□□□ -0.62
Khdc3Q9CWU5 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Khdc3Q9CWU5 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Khdc3Q9CWU5 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Khdc3Q9CWU5 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Khdc3Q9CWU5 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Khdc3Q9CWU5 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Khdc3Q9CWU5 Clip1-204ENSMUST00000111564 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Khdc3Q9CWU5 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Khdc3Q9CWU5 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Khdc3Q9CWU5 Tardbp-206ENSMUST00000105702 6425 ntTSL 5 BASIC11.17□□□□□ -0.62
Khdc3Q9CWU5 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Khdc3Q9CWU5 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Khdc3Q9CWU5 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Khdc3Q9CWU5 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Khdc3Q9CWU5 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
Khdc3Q9CWU5 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Khdc3Q9CWU5 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Khdc3Q9CWU5 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Khdc3Q9CWU5 Fam186a-202ENSMUST00000100209 9334 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Khdc3Q9CWU5 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC11.16□□□□□ -0.62
Khdc3Q9CWU5 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Khdc3Q9CWU5 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC11.16□□□□□ -0.62
Khdc3Q9CWU5 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Khdc3Q9CWU5 Myh1-202ENSMUST00000075734 6012 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Khdc3Q9CWU5 AC124397.2-201ENSMUST00000225575 2215 ntBASIC11.16□□□□□ -0.62
Khdc3Q9CWU5 Cln8-201ENSMUST00000027554 6857 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Khdc3Q9CWU5 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Khdc3Q9CWU5 Pbld1-202ENSMUST00000178684 2404 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Khdc3Q9CWU5 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Khdc3Q9CWU5 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC11.16□□□□□ -0.62
Khdc3Q9CWU5 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Khdc3Q9CWU5 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Khdc3Q9CWU5 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Khdc3Q9CWU5 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Khdc3Q9CWU5 Gm38228-201ENSMUST00000193169 1293 ntBASIC11.16□□□□□ -0.62
Khdc3Q9CWU5 Gm18038-201ENSMUST00000197900 485 ntBASIC11.16□□□□□ -0.62
Khdc3Q9CWU5 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Khdc3Q9CWU5 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Khdc3Q9CWU5 Gm270-201ENSMUST00000223010 976 ntBASIC11.16□□□□□ -0.62
Khdc3Q9CWU5 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC11.16□□□□□ -0.62
Khdc3Q9CWU5 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Khdc3Q9CWU5 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Khdc3Q9CWU5 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Khdc3Q9CWU5 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC11.16□□□□□ -0.62
Khdc3Q9CWU5 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Khdc3Q9CWU5 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Khdc3Q9CWU5 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Khdc3Q9CWU5 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Khdc3Q9CWU5 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Khdc3Q9CWU5 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Khdc3Q9CWU5 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Khdc3Q9CWU5 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Khdc3Q9CWU5 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Khdc3Q9CWU5 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Khdc3Q9CWU5 Tyk2-201ENSMUST00000001036 4619 ntAPPRIS P2 TSL 5 BASIC11.15□□□□□ -0.62
Khdc3Q9CWU5 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Khdc3Q9CWU5 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Khdc3Q9CWU5 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Khdc3Q9CWU5 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Khdc3Q9CWU5 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Khdc3Q9CWU5 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC11.15□□□□□ -0.62
Khdc3Q9CWU5 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Khdc3Q9CWU5 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Khdc3Q9CWU5 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Khdc3Q9CWU5 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Khdc3Q9CWU5 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Khdc3Q9CWU5 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Khdc3Q9CWU5 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Khdc3Q9CWU5 Adcy6-201ENSMUST00000096224 6038 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Khdc3Q9CWU5 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Khdc3Q9CWU5 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.62
Khdc3Q9CWU5 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Khdc3Q9CWU5 Gm15808-201ENSMUST00000119046 604 ntBASIC11.15□□□□□ -0.62
Khdc3Q9CWU5 Gm14208-201ENSMUST00000119645 678 ntBASIC11.15□□□□□ -0.62
Khdc3Q9CWU5 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC11.15□□□□□ -0.62
Khdc3Q9CWU5 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms