Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Thumpd1Q99J36 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Thumpd1Q99J36 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Thumpd1Q99J36 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Thumpd1Q99J36 Pdp2-201ENSMUST00000059588 5692 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Thumpd1Q99J36 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Thumpd1Q99J36 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Thumpd1Q99J36 Arpc3-202ENSMUST00000102525 899 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Thumpd1Q99J36 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Thumpd1Q99J36 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Thumpd1Q99J36 Gm11500-201ENSMUST00000118237 601 ntBASIC10.35□□□□□ -0.75
Thumpd1Q99J36 Gm12463-201ENSMUST00000118271 849 ntBASIC10.35□□□□□ -0.75
Thumpd1Q99J36 Gm13297-201ENSMUST00000120205 934 ntBASIC10.35□□□□□ -0.75
Thumpd1Q99J36 Gm11658-201ENSMUST00000120913 1008 ntBASIC10.35□□□□□ -0.75
Thumpd1Q99J36 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Thumpd1Q99J36 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC10.35□□□□□ -0.75
Thumpd1Q99J36 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Thumpd1Q99J36 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC10.35□□□□□ -0.75
Thumpd1Q99J36 Gm2467-201ENSMUST00000182266 1010 ntBASIC10.35□□□□□ -0.75
Thumpd1Q99J36 Gm6981-201ENSMUST00000182467 1008 ntBASIC10.35□□□□□ -0.75
Thumpd1Q99J36 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC10.35□□□□□ -0.75
Thumpd1Q99J36 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC10.35□□□□□ -0.75
Thumpd1Q99J36 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC10.35□□□□□ -0.75
Thumpd1Q99J36 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Thumpd1Q99J36 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Thumpd1Q99J36 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Thumpd1Q99J36 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Thumpd1Q99J36 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Thumpd1Q99J36 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Thumpd1Q99J36 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Thumpd1Q99J36 Robo1-201ENSMUST00000023600 7563 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Thumpd1Q99J36 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Thumpd1Q99J36 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Thumpd1Q99J36 Gm4864-201ENSMUST00000219894 1461 ntBASIC10.35□□□□□ -0.75
Thumpd1Q99J36 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Thumpd1Q99J36 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Thumpd1Q99J36 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Thumpd1Q99J36 Gm10548-201ENSMUST00000097631 2629 ntBASIC10.35□□□□□ -0.75
Thumpd1Q99J36 Map4-206ENSMUST00000169851 3446 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Thumpd1Q99J36 Zfp236-202ENSMUST00000182122 6059 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Thumpd1Q99J36 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC10.34□□□□□ -0.75
Thumpd1Q99J36 Gm10912-201ENSMUST00000104891 1661 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Thumpd1Q99J36 Gm10152-201ENSMUST00000193475 1344 ntBASIC10.34□□□□□ -0.75
Thumpd1Q99J36 Acot9-201ENSMUST00000026324 1752 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Thumpd1Q99J36 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Thumpd1Q99J36 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Thumpd1Q99J36 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Thumpd1Q99J36 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC10.34□□□□□ -0.75
Thumpd1Q99J36 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Thumpd1Q99J36 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC10.34□□□□□ -0.75
Thumpd1Q99J36 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Thumpd1Q99J36 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Thumpd1Q99J36 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Thumpd1Q99J36 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
Thumpd1Q99J36 Nipbl-201ENSMUST00000052965 8815 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Thumpd1Q99J36 Fibcd1-201ENSMUST00000028188 4751 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Thumpd1Q99J36 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Thumpd1Q99J36 Gm37954-201ENSMUST00000195400 2071 ntBASIC10.34□□□□□ -0.75
Thumpd1Q99J36 Mcf2l-217ENSMUST00000145067 5313 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Thumpd1Q99J36 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Thumpd1Q99J36 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Thumpd1Q99J36 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Thumpd1Q99J36 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Thumpd1Q99J36 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Thumpd1Q99J36 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Thumpd1Q99J36 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Thumpd1Q99J36 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Thumpd1Q99J36 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Thumpd1Q99J36 Gm11660-201ENSMUST00000120955 412 ntBASIC10.34□□□□□ -0.75
Thumpd1Q99J36 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Thumpd1Q99J36 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Thumpd1Q99J36 Gm3329-201ENSMUST00000159873 556 ntBASIC10.34□□□□□ -0.75
Thumpd1Q99J36 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC10.34□□□□□ -0.75
Thumpd1Q99J36 Mospd4-201ENSMUST00000180618 576 ntBASIC10.34□□□□□ -0.75
Thumpd1Q99J36 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC10.34□□□□□ -0.75
Thumpd1Q99J36 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Thumpd1Q99J36 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC10.34□□□□□ -0.75
Thumpd1Q99J36 Gm43118-201ENSMUST00000199149 775 ntBASIC10.34□□□□□ -0.75
Thumpd1Q99J36 Gm5950-201ENSMUST00000213337 772 ntBASIC10.34□□□□□ -0.75
Thumpd1Q99J36 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC10.34□□□□□ -0.75
Thumpd1Q99J36 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC10.34□□□□□ -0.75
Thumpd1Q99J36 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Thumpd1Q99J36 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC10.34□□□□□ -0.75
Thumpd1Q99J36 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Thumpd1Q99J36 Kbtbd12-206ENSMUST00000184878 3351 ntTSL 5 BASIC10.34□□□□□ -0.75
Thumpd1Q99J36 Myh1-202ENSMUST00000075734 6012 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Thumpd1Q99J36 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC10.34□□□□□ -0.75
Thumpd1Q99J36 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Thumpd1Q99J36 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Thumpd1Q99J36 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Thumpd1Q99J36 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Thumpd1Q99J36 Tenm2-201ENSMUST00000057207 8298 ntAPPRIS ALT1 TSL 5 BASIC10.34□□□□□ -0.75
Thumpd1Q99J36 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Thumpd1Q99J36 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC10.34□□□□□ -0.75
Thumpd1Q99J36 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC10.34□□□□□ -0.75
Thumpd1Q99J36 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC10.34□□□□□ -0.75
Thumpd1Q99J36 Gm43807-201ENSMUST00000200678 1781 ntBASIC10.34□□□□□ -0.75
Thumpd1Q99J36 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC10.34□□□□□ -0.75
Thumpd1Q99J36 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Thumpd1Q99J36 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms