Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Smc1bQ920F6 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Smc1bQ920F6 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Smc1bQ920F6 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Smc1bQ920F6 AC154639.1-201ENSMUST00000224393 2849 ntBASIC13.49□□□□□ -0.25
Smc1bQ920F6 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC13.49□□□□□ -0.25
Smc1bQ920F6 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Smc1bQ920F6 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Smc1bQ920F6 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smc1bQ920F6 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Smc1bQ920F6 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Smc1bQ920F6 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smc1bQ920F6 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smc1bQ920F6 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smc1bQ920F6 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Smc1bQ920F6 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smc1bQ920F6 Gm11949-201ENSMUST00000117640 372 ntBASIC13.49□□□□□ -0.25
Smc1bQ920F6 Gm11511-201ENSMUST00000118146 540 ntBASIC13.49□□□□□ -0.25
Smc1bQ920F6 Gm13263-201ENSMUST00000121271 838 ntBASIC13.49□□□□□ -0.25
Smc1bQ920F6 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Smc1bQ920F6 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC13.49□□□□□ -0.25
Smc1bQ920F6 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC13.49□□□□□ -0.25
Smc1bQ920F6 Gm20392-201ENSMUST00000173047 701 ntBASIC13.49□□□□□ -0.25
Smc1bQ920F6 Gm43692-201ENSMUST00000198236 1062 ntBASIC13.49□□□□□ -0.25
Smc1bQ920F6 Gm45120-201ENSMUST00000208880 408 ntBASIC13.49□□□□□ -0.25
Smc1bQ920F6 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smc1bQ920F6 Pbld1-206ENSMUST00000219687 788 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Smc1bQ920F6 AC134860.1-201ENSMUST00000224867 660 ntBASIC13.49□□□□□ -0.25
Smc1bQ920F6 n-R5s211-201ENSMUST00000093689 119 ntBASIC13.49□□□□□ -0.25
Smc1bQ920F6 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Smc1bQ920F6 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smc1bQ920F6 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smc1bQ920F6 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Smc1bQ920F6 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smc1bQ920F6 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Smc1bQ920F6 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smc1bQ920F6 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smc1bQ920F6 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smc1bQ920F6 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC13.48□□□□□ -0.25
Smc1bQ920F6 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smc1bQ920F6 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smc1bQ920F6 AC171277.1-201ENSMUST00000216902 1441 ntBASIC13.48□□□□□ -0.25
Smc1bQ920F6 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smc1bQ920F6 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Smc1bQ920F6 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC13.48□□□□□ -0.25
Smc1bQ920F6 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC13.48□□□□□ -0.25
Smc1bQ920F6 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smc1bQ920F6 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smc1bQ920F6 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Smc1bQ920F6 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smc1bQ920F6 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smc1bQ920F6 Gm12969-201ENSMUST00000120199 1004 ntBASIC13.48□□□□□ -0.25
Smc1bQ920F6 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC13.48□□□□□ -0.25
Smc1bQ920F6 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC13.48□□□□□ -0.25
Smc1bQ920F6 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Smc1bQ920F6 Gm23119-201ENSMUST00000158610 140 ntBASIC13.48□□□□□ -0.25
Smc1bQ920F6 Gm18159-201ENSMUST00000174516 1070 ntBASIC13.48□□□□□ -0.25
Smc1bQ920F6 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC13.48□□□□□ -0.25
Smc1bQ920F6 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Smc1bQ920F6 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC13.48□□□□□ -0.25
Smc1bQ920F6 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC13.48□□□□□ -0.25
Smc1bQ920F6 Gm2875-201ENSMUST00000211333 360 ntBASIC13.48□□□□□ -0.25
Smc1bQ920F6 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Smc1bQ920F6 AC154257.1-202ENSMUST00000224729 843 ntBASIC13.48□□□□□ -0.25
Smc1bQ920F6 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Smc1bQ920F6 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smc1bQ920F6 Rab7-201ENSMUST00000095048 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smc1bQ920F6 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smc1bQ920F6 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smc1bQ920F6 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smc1bQ920F6 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smc1bQ920F6 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smc1bQ920F6 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smc1bQ920F6 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smc1bQ920F6 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Smc1bQ920F6 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Smc1bQ920F6 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smc1bQ920F6 Gm7278-201ENSMUST00000119836 1401 ntBASIC13.47□□□□□ -0.25
Smc1bQ920F6 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Smc1bQ920F6 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Smc1bQ920F6 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Smc1bQ920F6 Gm43984-201ENSMUST00000204572 2864 ntBASIC13.47□□□□□ -0.25
Smc1bQ920F6 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Smc1bQ920F6 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Smc1bQ920F6 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Smc1bQ920F6 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Smc1bQ920F6 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Smc1bQ920F6 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Smc1bQ920F6 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Smc1bQ920F6 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Smc1bQ920F6 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Smc1bQ920F6 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC13.47□□□□□ -0.25
Smc1bQ920F6 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Smc1bQ920F6 Gm15725-201ENSMUST00000119947 1090 ntBASIC13.47□□□□□ -0.25
Smc1bQ920F6 Gm14219-201ENSMUST00000120414 288 ntBASIC13.47□□□□□ -0.25
Smc1bQ920F6 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC13.47□□□□□ -0.25
Smc1bQ920F6 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Smc1bQ920F6 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Smc1bQ920F6 Mir8115-201ENSMUST00000184992 119 ntBASIC13.47□□□□□ -0.25
Smc1bQ920F6 Gm28388-201ENSMUST00000186262 437 ntBASIC13.47□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 64.4 ms