Protein–RNA interactions for Protein: Q91Y02

Pcdhb18, Protocadherin beta-18, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb18Q91Y02 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
Pcdhb18Q91Y02 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC12.19□□□□□ -0.46
Pcdhb18Q91Y02 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhb18Q91Y02 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Pcdhb18Q91Y02 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhb18Q91Y02 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhb18Q91Y02 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhb18Q91Y02 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhb18Q91Y02 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC12.19□□□□□ -0.46
Pcdhb18Q91Y02 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
Pcdhb18Q91Y02 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC12.19□□□□□ -0.46
Pcdhb18Q91Y02 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Pcdhb18Q91Y02 Gm2238-201ENSMUST00000192074 3669 ntBASIC12.19□□□□□ -0.46
Pcdhb18Q91Y02 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhb18Q91Y02 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhb18Q91Y02 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Pcdhb18Q91Y02 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Pcdhb18Q91Y02 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhb18Q91Y02 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC12.19□□□□□ -0.46
Pcdhb18Q91Y02 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhb18Q91Y02 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC12.19□□□□□ -0.46
Pcdhb18Q91Y02 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhb18Q91Y02 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC12.19□□□□□ -0.46
Pcdhb18Q91Y02 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC12.19□□□□□ -0.46
Pcdhb18Q91Y02 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhb18Q91Y02 Gm7940-201ENSMUST00000218195 769 ntBASIC12.19□□□□□ -0.46
Pcdhb18Q91Y02 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhb18Q91Y02 CT025553.1-201ENSMUST00000226292 299 ntBASIC12.19□□□□□ -0.46
Pcdhb18Q91Y02 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhb18Q91Y02 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhb18Q91Y02 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhb18Q91Y02 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC12.19□□□□□ -0.46
Pcdhb18Q91Y02 Ptprm-203ENSMUST00000224091 3773 ntBASIC12.19□□□□□ -0.46
Pcdhb18Q91Y02 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhb18Q91Y02 AC164426.2-201ENSMUST00000225993 2492 ntBASIC12.19□□□□□ -0.46
Pcdhb18Q91Y02 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhb18Q91Y02 AC160410.1-201ENSMUST00000219298 1972 ntBASIC12.19□□□□□ -0.46
Pcdhb18Q91Y02 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhb18Q91Y02 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Pcdhb18Q91Y02 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhb18Q91Y02 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhb18Q91Y02 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhb18Q91Y02 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhb18Q91Y02 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Pcdhb18Q91Y02 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Pcdhb18Q91Y02 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhb18Q91Y02 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhb18Q91Y02 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhb18Q91Y02 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhb18Q91Y02 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhb18Q91Y02 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Pcdhb18Q91Y02 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhb18Q91Y02 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhb18Q91Y02 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhb18Q91Y02 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC12.18□□□□□ -0.46
Pcdhb18Q91Y02 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhb18Q91Y02 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhb18Q91Y02 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhb18Q91Y02 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhb18Q91Y02 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhb18Q91Y02 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhb18Q91Y02 Gm16166-201ENSMUST00000118291 787 ntBASIC12.18□□□□□ -0.46
Pcdhb18Q91Y02 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC12.18□□□□□ -0.46
Pcdhb18Q91Y02 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC12.18□□□□□ -0.46
Pcdhb18Q91Y02 Gm24398-201ENSMUST00000157870 109 ntBASIC12.18□□□□□ -0.46
Pcdhb18Q91Y02 Mocs2-205ENSMUST00000165022 962 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhb18Q91Y02 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhb18Q91Y02 Gm28937-201ENSMUST00000185413 695 ntBASIC12.18□□□□□ -0.46
Pcdhb18Q91Y02 Gm29400-201ENSMUST00000187208 695 ntBASIC12.18□□□□□ -0.46
Pcdhb18Q91Y02 Gm28662-201ENSMUST00000188446 695 ntBASIC12.18□□□□□ -0.46
Pcdhb18Q91Y02 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC12.18□□□□□ -0.46
Pcdhb18Q91Y02 Gm28251-201ENSMUST00000188835 695 ntBASIC12.18□□□□□ -0.46
Pcdhb18Q91Y02 Gm37458-201ENSMUST00000194055 410 ntBASIC12.18□□□□□ -0.46
Pcdhb18Q91Y02 Gm37981-201ENSMUST00000194280 535 ntBASIC12.18□□□□□ -0.46
Pcdhb18Q91Y02 Gm37318-201ENSMUST00000194325 695 ntBASIC12.18□□□□□ -0.46
Pcdhb18Q91Y02 Gm38017-201ENSMUST00000194768 695 ntBASIC12.18□□□□□ -0.46
Pcdhb18Q91Y02 Gm37287-201ENSMUST00000195449 695 ntBASIC12.18□□□□□ -0.46
Pcdhb18Q91Y02 Gm37793-201ENSMUST00000195548 695 ntBASIC12.18□□□□□ -0.46
Pcdhb18Q91Y02 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhb18Q91Y02 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC12.18□□□□□ -0.46
Pcdhb18Q91Y02 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC12.18□□□□□ -0.46
Pcdhb18Q91Y02 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC12.18□□□□□ -0.46
Pcdhb18Q91Y02 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhb18Q91Y02 Gm44152-201ENSMUST00000205007 1691 ntBASIC12.18□□□□□ -0.46
Pcdhb18Q91Y02 Gm43075-201ENSMUST00000198613 3905 ntBASIC12.18□□□□□ -0.46
Pcdhb18Q91Y02 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhb18Q91Y02 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhb18Q91Y02 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhb18Q91Y02 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhb18Q91Y02 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhb18Q91Y02 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhb18Q91Y02 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhb18Q91Y02 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Pcdhb18Q91Y02 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC12.17□□□□□ -0.46
Pcdhb18Q91Y02 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhb18Q91Y02 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhb18Q91Y02 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhb18Q91Y02 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Pcdhb18Q91Y02 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhb18Q91Y02 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms