Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdhb3Q91XZ7 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Pcdhb3Q91XZ7 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Pcdhb3Q91XZ7 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdhb3Q91XZ7 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdhb3Q91XZ7 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdhb3Q91XZ7 Gm38194-201ENSMUST00000194529 2211 ntBASIC11.91□□□□□ -0.5
Pcdhb3Q91XZ7 Gm5860-202ENSMUST00000151038 1711 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdhb3Q91XZ7 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdhb3Q91XZ7 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdhb3Q91XZ7 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdhb3Q91XZ7 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdhb3Q91XZ7 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Pcdhb3Q91XZ7 Tia1-206ENSMUST00000113713 3108 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdhb3Q91XZ7 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC11.91□□□□□ -0.5
Pcdhb3Q91XZ7 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC11.9□□□□□ -0.5
Pcdhb3Q91XZ7 Muc13-201ENSMUST00000023520 2942 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdhb3Q91XZ7 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC11.9□□□□□ -0.5
Pcdhb3Q91XZ7 Ctsll3-201ENSMUST00000043754 1337 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdhb3Q91XZ7 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdhb3Q91XZ7 Tgfb1i1-201ENSMUST00000070656 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdhb3Q91XZ7 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdhb3Q91XZ7 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdhb3Q91XZ7 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
Pcdhb3Q91XZ7 Gm12329-201ENSMUST00000120829 1007 ntBASIC11.9□□□□□ -0.5
Pcdhb3Q91XZ7 Gm12296-201ENSMUST00000144922 3220 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdhb3Q91XZ7 Gm15445-201ENSMUST00000146700 603 ntTSL 5 BASIC11.9□□□□□ -0.5
Pcdhb3Q91XZ7 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC11.9□□□□□ -0.5
Pcdhb3Q91XZ7 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdhb3Q91XZ7 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdhb3Q91XZ7 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdhb3Q91XZ7 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdhb3Q91XZ7 Gm42782-201ENSMUST00000197286 522 ntBASIC11.9□□□□□ -0.5
Pcdhb3Q91XZ7 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC11.9□□□□□ -0.5
Pcdhb3Q91XZ7 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC11.9□□□□□ -0.5
Pcdhb3Q91XZ7 Olfr153-201ENSMUST00000217113 1258 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Pcdhb3Q91XZ7 Mrpl42-202ENSMUST00000217777 455 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdhb3Q91XZ7 AC140368.1-202ENSMUST00000226131 658 ntBASIC11.9□□□□□ -0.5
Pcdhb3Q91XZ7 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdhb3Q91XZ7 Ttc23-201ENSMUST00000032774 2492 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdhb3Q91XZ7 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdhb3Q91XZ7 Gm9823-201ENSMUST00000051212 327 ntBASIC11.9□□□□□ -0.5
Pcdhb3Q91XZ7 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Pcdhb3Q91XZ7 Olfr582-201ENSMUST00000098212 960 ntBASIC11.9□□□□□ -0.5
Pcdhb3Q91XZ7 CT010480.4-201ENSMUST00000224654 2283 ntBASIC11.9□□□□□ -0.5
Pcdhb3Q91XZ7 Ccdc63-201ENSMUST00000058960 2299 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdhb3Q91XZ7 Usp2-203ENSMUST00000114830 2122 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdhb3Q91XZ7 Prr30-202ENSMUST00000187304 2104 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Pcdhb3Q91XZ7 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdhb3Q91XZ7 AC160405.1-201ENSMUST00000218207 1545 ntBASIC11.9□□□□□ -0.5
Pcdhb3Q91XZ7 Rasgrp4-212ENSMUST00000204194 2993 ntTSL 5 BASIC11.9□□□□□ -0.5
Pcdhb3Q91XZ7 Ahnak2-201ENSMUST00000101010 2821 ntAPPRIS ALT2 BASIC11.9□□□□□ -0.5
Pcdhb3Q91XZ7 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC11.9□□□□□ -0.5
Pcdhb3Q91XZ7 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdhb3Q91XZ7 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdhb3Q91XZ7 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Pcdhb3Q91XZ7 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Pcdhb3Q91XZ7 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Pcdhb3Q91XZ7 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Pcdhb3Q91XZ7 Mroh8-202ENSMUST00000143663 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Pcdhb3Q91XZ7 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Pcdhb3Q91XZ7 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhb3Q91XZ7 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Pcdhb3Q91XZ7 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC11.89□□□□□ -0.51
Pcdhb3Q91XZ7 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhb3Q91XZ7 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhb3Q91XZ7 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhb3Q91XZ7 Mapkap1-209ENSMUST00000147337 3111 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhb3Q91XZ7 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhb3Q91XZ7 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC11.89□□□□□ -0.51
Pcdhb3Q91XZ7 Mapre2-203ENSMUST00000118826 3052 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhb3Q91XZ7 Cryz-201ENSMUST00000029850 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhb3Q91XZ7 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Pcdhb3Q91XZ7 Tacc2-205ENSMUST00000207282 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhb3Q91XZ7 Gm44207-201ENSMUST00000204568 1424 ntBASIC11.89□□□□□ -0.51
Pcdhb3Q91XZ7 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhb3Q91XZ7 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhb3Q91XZ7 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
Pcdhb3Q91XZ7 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC11.89□□□□□ -0.51
Pcdhb3Q91XZ7 Gm12788-201ENSMUST00000119090 308 ntBASIC11.89□□□□□ -0.51
Pcdhb3Q91XZ7 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhb3Q91XZ7 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhb3Q91XZ7 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC11.89□□□□□ -0.51
Pcdhb3Q91XZ7 Gm7289-201ENSMUST00000168993 734 ntBASIC11.89□□□□□ -0.51
Pcdhb3Q91XZ7 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhb3Q91XZ7 Scnm1-201ENSMUST00000172572 1054 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhb3Q91XZ7 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhb3Q91XZ7 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC11.89□□□□□ -0.51
Pcdhb3Q91XZ7 Gm18348-201ENSMUST00000191227 820 ntBASIC11.89□□□□□ -0.51
Pcdhb3Q91XZ7 Gm43133-201ENSMUST00000197472 463 ntBASIC11.89□□□□□ -0.51
Pcdhb3Q91XZ7 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC11.89□□□□□ -0.51
Pcdhb3Q91XZ7 Gm30978-201ENSMUST00000211581 1066 ntTSL 5 BASIC11.89□□□□□ -0.51
Pcdhb3Q91XZ7 AC153544.1-201ENSMUST00000217988 400 ntBASIC11.89□□□□□ -0.51
Pcdhb3Q91XZ7 Gm10371-202ENSMUST00000228010 1081 ntBASIC11.89□□□□□ -0.51
Pcdhb3Q91XZ7 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhb3Q91XZ7 Dapl1-201ENSMUST00000028369 573 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhb3Q91XZ7 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhb3Q91XZ7 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhb3Q91XZ7 Cbx3-202ENSMUST00000094623 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhb3Q91XZ7 Gm17415-201ENSMUST00000096427 789 ntBASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 61.3 ms