Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Gm12997-201ENSMUST00000120207 640 ntBASIC11.93□□□□□ -0.5
Pcdhb6Q91XZ4 Gm11450-201ENSMUST00000121144 333 ntBASIC11.93□□□□□ -0.5
Pcdhb6Q91XZ4 Gm7150-201ENSMUST00000122032 981 ntBASIC11.93□□□□□ -0.5
Pcdhb6Q91XZ4 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC11.93□□□□□ -0.5
Pcdhb6Q91XZ4 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdhb6Q91XZ4 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC11.93□□□□□ -0.5
Pcdhb6Q91XZ4 Gm28450-201ENSMUST00000187349 638 ntBASIC11.93□□□□□ -0.5
Pcdhb6Q91XZ4 Gm6108-201ENSMUST00000208365 367 ntBASIC11.93□□□□□ -0.5
Pcdhb6Q91XZ4 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdhb6Q91XZ4 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC11.93□□□□□ -0.5
Pcdhb6Q91XZ4 A430010J10Rik-201ENSMUST00000054470 408 ntBASIC11.93□□□□□ -0.5
Pcdhb6Q91XZ4 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdhb6Q91XZ4 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdhb6Q91XZ4 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Pcdhb6Q91XZ4 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdhb6Q91XZ4 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdhb6Q91XZ4 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC11.93□□□□□ -0.5
Pcdhb6Q91XZ4 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdhb6Q91XZ4 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC11.93□□□□□ -0.5
Pcdhb6Q91XZ4 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdhb6Q91XZ4 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdhb6Q91XZ4 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdhb6Q91XZ4 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdhb6Q91XZ4 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdhb6Q91XZ4 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC11.92□□□□□ -0.5
Pcdhb6Q91XZ4 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhb6Q91XZ4 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhb6Q91XZ4 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhb6Q91XZ4 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhb6Q91XZ4 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Pcdhb6Q91XZ4 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhb6Q91XZ4 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhb6Q91XZ4 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhb6Q91XZ4 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhb6Q91XZ4 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhb6Q91XZ4 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhb6Q91XZ4 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC11.92□□□□□ -0.5
Pcdhb6Q91XZ4 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC11.92□□□□□ -0.5
Pcdhb6Q91XZ4 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhb6Q91XZ4 Gm15236-201ENSMUST00000117309 379 ntBASIC11.92□□□□□ -0.5
Pcdhb6Q91XZ4 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhb6Q91XZ4 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhb6Q91XZ4 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhb6Q91XZ4 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhb6Q91XZ4 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC11.92□□□□□ -0.5
Pcdhb6Q91XZ4 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC11.92□□□□□ -0.5
Pcdhb6Q91XZ4 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC11.92□□□□□ -0.5
Pcdhb6Q91XZ4 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhb6Q91XZ4 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC11.92□□□□□ -0.5
Pcdhb6Q91XZ4 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC11.92□□□□□ -0.5
Pcdhb6Q91XZ4 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhb6Q91XZ4 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC11.92□□□□□ -0.5
Pcdhb6Q91XZ4 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC11.92□□□□□ -0.5
Pcdhb6Q91XZ4 Gm5369-201ENSMUST00000217499 588 ntBASIC11.92□□□□□ -0.5
Pcdhb6Q91XZ4 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC11.92□□□□□ -0.5
Pcdhb6Q91XZ4 AC134860.1-201ENSMUST00000224867 660 ntBASIC11.92□□□□□ -0.5
Pcdhb6Q91XZ4 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhb6Q91XZ4 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhb6Q91XZ4 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Pcdhb6Q91XZ4 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhb6Q91XZ4 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC11.92□□□□□ -0.5
Pcdhb6Q91XZ4 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhb6Q91XZ4 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhb6Q91XZ4 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhb6Q91XZ4 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Pcdhb6Q91XZ4 CT010447.1-201ENSMUST00000225657 1608 ntBASIC11.92□□□□□ -0.5
Pcdhb6Q91XZ4 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhb6Q91XZ4 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhb6Q91XZ4 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhb6Q91XZ4 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC11.92□□□□□ -0.5
Pcdhb6Q91XZ4 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhb6Q91XZ4 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhb6Q91XZ4 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhb6Q91XZ4 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
Pcdhb6Q91XZ4 Gm6580-201ENSMUST00000117504 1357 ntBASIC11.92□□□□□ -0.5
Pcdhb6Q91XZ4 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC11.92□□□□□ -0.5
Pcdhb6Q91XZ4 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdhb6Q91XZ4 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC11.91□□□□□ -0.5
Pcdhb6Q91XZ4 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdhb6Q91XZ4 Gm21136-201ENSMUST00000186812 2575 ntBASIC11.91□□□□□ -0.5
Pcdhb6Q91XZ4 Gm6605-201ENSMUST00000031488 2574 ntBASIC11.91□□□□□ -0.5
Pcdhb6Q91XZ4 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdhb6Q91XZ4 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdhb6Q91XZ4 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdhb6Q91XZ4 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdhb6Q91XZ4 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdhb6Q91XZ4 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC11.91□□□□□ -0.5
Pcdhb6Q91XZ4 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC11.91□□□□□ -0.5
Pcdhb6Q91XZ4 Gm15595-201ENSMUST00000120840 961 ntBASIC11.91□□□□□ -0.5
Pcdhb6Q91XZ4 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdhb6Q91XZ4 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC11.91□□□□□ -0.5
Pcdhb6Q91XZ4 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC11.91□□□□□ -0.5
Pcdhb6Q91XZ4 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC11.91□□□□□ -0.5
Pcdhb6Q91XZ4 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC11.91□□□□□ -0.5
Pcdhb6Q91XZ4 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdhb6Q91XZ4 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC11.91□□□□□ -0.5
Pcdhb6Q91XZ4 Gm9540-201ENSMUST00000188230 478 ntBASIC11.91□□□□□ -0.5
Pcdhb6Q91XZ4 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Pcdhb6Q91XZ4 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC11.91□□□□□ -0.5
Pcdhb6Q91XZ4 Gm44008-201ENSMUST00000204345 412 ntBASIC11.91□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms