Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC11.26□□□□□ -0.61
Pcdh18Q8VHR0 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC11.26□□□□□ -0.61
Pcdh18Q8VHR0 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC11.26□□□□□ -0.61
Pcdh18Q8VHR0 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Pcdh18Q8VHR0 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pcdh18Q8VHR0 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pcdh18Q8VHR0 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Pcdh18Q8VHR0 Gm2673-201ENSMUST00000120958 1608 ntBASIC11.26□□□□□ -0.61
Pcdh18Q8VHR0 AC131029.1-201ENSMUST00000226391 2929 ntBASIC11.26□□□□□ -0.61
Pcdh18Q8VHR0 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pcdh18Q8VHR0 Gm45597-201ENSMUST00000211524 1994 ntBASIC11.26□□□□□ -0.61
Pcdh18Q8VHR0 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pcdh18Q8VHR0 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pcdh18Q8VHR0 Tbc1d17-201ENSMUST00000047085 8750 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pcdh18Q8VHR0 Scrn1-201ENSMUST00000019268 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pcdh18Q8VHR0 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Pcdh18Q8VHR0 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Pcdh18Q8VHR0 BC049352-203ENSMUST00000171799 1714 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pcdh18Q8VHR0 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Pcdh18Q8VHR0 Hrc-201ENSMUST00000085351 2411 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pcdh18Q8VHR0 Gm11131-201ENSMUST00000113886 3122 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Pcdh18Q8VHR0 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pcdh18Q8VHR0 Chd1-201ENSMUST00000024620 3196 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Pcdh18Q8VHR0 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pcdh18Q8VHR0 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pcdh18Q8VHR0 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Pcdh18Q8VHR0 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pcdh18Q8VHR0 Prss57-201ENSMUST00000020573 2693 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pcdh18Q8VHR0 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pcdh18Q8VHR0 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pcdh18Q8VHR0 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC11.25□□□□□ -0.61
Pcdh18Q8VHR0 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pcdh18Q8VHR0 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pcdh18Q8VHR0 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pcdh18Q8VHR0 Gm37737-201ENSMUST00000195013 1638 ntBASIC11.25□□□□□ -0.61
Pcdh18Q8VHR0 Gm26865-201ENSMUST00000180970 3284 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Pcdh18Q8VHR0 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pcdh18Q8VHR0 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC11.25□□□□□ -0.61
Pcdh18Q8VHR0 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pcdh18Q8VHR0 Ncstn-201ENSMUST00000003550 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pcdh18Q8VHR0 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Pcdh18Q8VHR0 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Pcdh18Q8VHR0 Gm13316-201ENSMUST00000140537 691 ntBASIC11.25□□□□□ -0.61
Pcdh18Q8VHR0 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC11.25□□□□□ -0.61
Pcdh18Q8VHR0 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC11.25□□□□□ -0.61
Pcdh18Q8VHR0 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC11.25□□□□□ -0.61
Pcdh18Q8VHR0 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pcdh18Q8VHR0 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pcdh18Q8VHR0 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC11.25□□□□□ -0.61
Pcdh18Q8VHR0 Gm9728-201ENSMUST00000200197 1055 ntBASIC11.25□□□□□ -0.61
Pcdh18Q8VHR0 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC11.25□□□□□ -0.61
Pcdh18Q8VHR0 Gm17823-201ENSMUST00000217830 1006 ntBASIC11.25□□□□□ -0.61
Pcdh18Q8VHR0 AC125350.2-201ENSMUST00000224737 727 ntBASIC11.25□□□□□ -0.61
Pcdh18Q8VHR0 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Pcdh18Q8VHR0 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Pcdh18Q8VHR0 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Pcdh18Q8VHR0 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Pcdh18Q8VHR0 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Pcdh18Q8VHR0 Odf2l-202ENSMUST00000098538 2564 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Pcdh18Q8VHR0 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pcdh18Q8VHR0 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pcdh18Q8VHR0 Armcx3-203ENSMUST00000086884 3488 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Pcdh18Q8VHR0 Themis2-201ENSMUST00000045154 3079 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pcdh18Q8VHR0 Gm5703-201ENSMUST00000186658 3973 ntBASIC11.25□□□□□ -0.61
Pcdh18Q8VHR0 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pcdh18Q8VHR0 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Pcdh18Q8VHR0 Cfap61-204ENSMUST00000126415 2256 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Pcdh18Q8VHR0 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pcdh18Q8VHR0 AC107453.4-201ENSMUST00000227068 1817 ntBASIC11.25□□□□□ -0.61
Pcdh18Q8VHR0 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pcdh18Q8VHR0 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC11.25□□□□□ -0.61
Pcdh18Q8VHR0 Scamp2-201ENSMUST00000045791 2340 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pcdh18Q8VHR0 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pcdh18Q8VHR0 Tnpo3-201ENSMUST00000012679 4251 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pcdh18Q8VHR0 Gm5833-202ENSMUST00000190707 1932 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Pcdh18Q8VHR0 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pcdh18Q8VHR0 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pcdh18Q8VHR0 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pcdh18Q8VHR0 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pcdh18Q8VHR0 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pcdh18Q8VHR0 Slitrk3-202ENSMUST00000192477 4592 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pcdh18Q8VHR0 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pcdh18Q8VHR0 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pcdh18Q8VHR0 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pcdh18Q8VHR0 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC11.24□□□□□ -0.61
Pcdh18Q8VHR0 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC11.24□□□□□ -0.61
Pcdh18Q8VHR0 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pcdh18Q8VHR0 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pcdh18Q8VHR0 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
Pcdh18Q8VHR0 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC11.24□□□□□ -0.61
Pcdh18Q8VHR0 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pcdh18Q8VHR0 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pcdh18Q8VHR0 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pcdh18Q8VHR0 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Pcdh18Q8VHR0 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Pcdh18Q8VHR0 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pcdh18Q8VHR0 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pcdh18Q8VHR0 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pcdh18Q8VHR0 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pcdh18Q8VHR0 Gm23912-201ENSMUST00000104687 87 ntBASIC11.24□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 65.9 ms