Protein–RNA interactions for Protein: Q8VHP6

Cdhr1, Cadherin-related family member 1, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr1Q8VHP6 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdhr1Q8VHP6 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC11.48□□□□□ -0.57
Cdhr1Q8VHP6 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdhr1Q8VHP6 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Cdhr1Q8VHP6 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Cdhr1Q8VHP6 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Cdhr1Q8VHP6 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cdhr1Q8VHP6 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cdhr1Q8VHP6 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cdhr1Q8VHP6 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Cdhr1Q8VHP6 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Cdhr1Q8VHP6 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cdhr1Q8VHP6 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cdhr1Q8VHP6 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cdhr1Q8VHP6 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Cdhr1Q8VHP6 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC11.47□□□□□ -0.57
Cdhr1Q8VHP6 Gm8522-201ENSMUST00000118416 1929 ntBASIC11.47□□□□□ -0.57
Cdhr1Q8VHP6 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cdhr1Q8VHP6 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Cdhr1Q8VHP6 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cdhr1Q8VHP6 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC11.47□□□□□ -0.57
Cdhr1Q8VHP6 Gm12036-201ENSMUST00000120008 530 ntBASIC11.47□□□□□ -0.57
Cdhr1Q8VHP6 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Cdhr1Q8VHP6 Gm10731-201ENSMUST00000181171 448 ntBASIC11.47□□□□□ -0.57
Cdhr1Q8VHP6 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC11.47□□□□□ -0.57
Cdhr1Q8VHP6 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cdhr1Q8VHP6 Ighv5-11-201ENSMUST00000193354 371 ntBASIC11.47□□□□□ -0.57
Cdhr1Q8VHP6 Gm5542-201ENSMUST00000195485 1089 ntBASIC11.47□□□□□ -0.57
Cdhr1Q8VHP6 Gm44980-201ENSMUST00000205826 314 ntBASIC11.47□□□□□ -0.57
Cdhr1Q8VHP6 Gm44506-201ENSMUST00000206278 965 ntBASIC11.47□□□□□ -0.57
Cdhr1Q8VHP6 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Cdhr1Q8VHP6 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Cdhr1Q8VHP6 AC122840.1-201ENSMUST00000220915 3334 ntBASIC11.47□□□□□ -0.57
Cdhr1Q8VHP6 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cdhr1Q8VHP6 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Cdhr1Q8VHP6 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cdhr1Q8VHP6 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC11.47□□□□□ -0.57
Cdhr1Q8VHP6 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Cdhr1Q8VHP6 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Cdhr1Q8VHP6 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cdhr1Q8VHP6 Olfr464-205ENSMUST00000217112 2232 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Cdhr1Q8VHP6 Gm7224-201ENSMUST00000121359 2066 ntBASIC11.47□□□□□ -0.57
Cdhr1Q8VHP6 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cdhr1Q8VHP6 Brat1-202ENSMUST00000100505 3431 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cdhr1Q8VHP6 Gm17244-201ENSMUST00000192482 3416 ntBASIC11.47□□□□□ -0.57
Cdhr1Q8VHP6 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cdhr1Q8VHP6 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cdhr1Q8VHP6 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cdhr1Q8VHP6 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cdhr1Q8VHP6 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cdhr1Q8VHP6 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cdhr1Q8VHP6 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cdhr1Q8VHP6 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC11.46□□□□□ -0.57
Cdhr1Q8VHP6 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC11.46□□□□□ -0.57
Cdhr1Q8VHP6 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cdhr1Q8VHP6 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC11.46□□□□□ -0.57
Cdhr1Q8VHP6 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cdhr1Q8VHP6 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cdhr1Q8VHP6 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cdhr1Q8VHP6 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Cdhr1Q8VHP6 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC11.46□□□□□ -0.57
Cdhr1Q8VHP6 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC11.46□□□□□ -0.57
Cdhr1Q8VHP6 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC11.46□□□□□ -0.57
Cdhr1Q8VHP6 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC11.46□□□□□ -0.57
Cdhr1Q8VHP6 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Cdhr1Q8VHP6 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Cdhr1Q8VHP6 Gm5778-201ENSMUST00000171003 1072 ntBASIC11.46□□□□□ -0.57
Cdhr1Q8VHP6 Gm18367-201ENSMUST00000176139 600 ntBASIC11.46□□□□□ -0.57
Cdhr1Q8VHP6 Gm9192-201ENSMUST00000183221 985 ntBASIC11.46□□□□□ -0.57
Cdhr1Q8VHP6 Gm37299-201ENSMUST00000193951 826 ntBASIC11.46□□□□□ -0.57
Cdhr1Q8VHP6 Gm9645-201ENSMUST00000197131 792 ntBASIC11.46□□□□□ -0.57
Cdhr1Q8VHP6 AC153937.1-201ENSMUST00000218734 412 ntBASIC11.46□□□□□ -0.57
Cdhr1Q8VHP6 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC11.46□□□□□ -0.57
Cdhr1Q8VHP6 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC11.46□□□□□ -0.57
Cdhr1Q8VHP6 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Cdhr1Q8VHP6 AC140293.1-201ENSMUST00000225626 1247 ntBASIC11.46□□□□□ -0.57
Cdhr1Q8VHP6 1700016D06Rik-201ENSMUST00000033906 1263 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cdhr1Q8VHP6 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cdhr1Q8VHP6 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Cdhr1Q8VHP6 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cdhr1Q8VHP6 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cdhr1Q8VHP6 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Cdhr1Q8VHP6 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cdhr1Q8VHP6 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Cdhr1Q8VHP6 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cdhr1Q8VHP6 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cdhr1Q8VHP6 CT009489.1-201ENSMUST00000227740 1893 ntBASIC11.46□□□□□ -0.58
Cdhr1Q8VHP6 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cdhr1Q8VHP6 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Cdhr1Q8VHP6 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Cdhr1Q8VHP6 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cdhr1Q8VHP6 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC11.46□□□□□ -0.58
Cdhr1Q8VHP6 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cdhr1Q8VHP6 Gm5053-201ENSMUST00000208361 1678 ntBASIC11.46□□□□□ -0.58
Cdhr1Q8VHP6 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cdhr1Q8VHP6 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cdhr1Q8VHP6 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Cdhr1Q8VHP6 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cdhr1Q8VHP6 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cdhr1Q8VHP6 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 124.3 ms