Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Smco3Q8BQM7 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC9.55□□□□□ -0.88
Smco3Q8BQM7 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Smco3Q8BQM7 Sema4a-201ENSMUST00000029700 3205 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Smco3Q8BQM7 Ncdn-201ENSMUST00000030637 3681 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Smco3Q8BQM7 Fam184b-201ENSMUST00000016023 4236 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Smco3Q8BQM7 Nol8-209ENSMUST00000223467 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Smco3Q8BQM7 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Smco3Q8BQM7 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC9.55□□□□□ -0.88
Smco3Q8BQM7 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Smco3Q8BQM7 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC9.55□□□□□ -0.88
Smco3Q8BQM7 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Smco3Q8BQM7 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Smco3Q8BQM7 Mir1894-201ENSMUST00000122802 81 ntBASIC9.55□□□□□ -0.88
Smco3Q8BQM7 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Smco3Q8BQM7 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Smco3Q8BQM7 Gm24644-201ENSMUST00000157114 139 ntBASIC9.55□□□□□ -0.88
Smco3Q8BQM7 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC9.55□□□□□ -0.88
Smco3Q8BQM7 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Smco3Q8BQM7 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Smco3Q8BQM7 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Smco3Q8BQM7 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Smco3Q8BQM7 Gm8652-201ENSMUST00000181363 964 ntBASIC9.55□□□□□ -0.88
Smco3Q8BQM7 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC9.55□□□□□ -0.88
Smco3Q8BQM7 Gm27486-201ENSMUST00000184923 80 ntBASIC9.55□□□□□ -0.88
Smco3Q8BQM7 Gm8515-201ENSMUST00000194852 576 ntBASIC9.55□□□□□ -0.88
Smco3Q8BQM7 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC9.55□□□□□ -0.88
Smco3Q8BQM7 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC9.55□□□□□ -0.88
Smco3Q8BQM7 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC9.55□□□□□ -0.88
Smco3Q8BQM7 Gm17794-201ENSMUST00000220252 955 ntBASIC9.55□□□□□ -0.88
Smco3Q8BQM7 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC9.55□□□□□ -0.88
Smco3Q8BQM7 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Smco3Q8BQM7 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Smco3Q8BQM7 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC9.55□□□□□ -0.88
Smco3Q8BQM7 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC9.55□□□□□ -0.88
Smco3Q8BQM7 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Smco3Q8BQM7 Grem1-201ENSMUST00000099575 4148 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Smco3Q8BQM7 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Smco3Q8BQM7 Rnf41-201ENSMUST00000096386 3144 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Smco3Q8BQM7 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Smco3Q8BQM7 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Smco3Q8BQM7 Nod1-202ENSMUST00000168172 4064 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Smco3Q8BQM7 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Smco3Q8BQM7 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
Smco3Q8BQM7 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
Smco3Q8BQM7 Rsph10b-203ENSMUST00000166847 2878 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Smco3Q8BQM7 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Smco3Q8BQM7 Vmn1r16-203ENSMUST00000228356 3492 ntAPPRIS ALT2 BASIC9.54□□□□□ -0.88
Smco3Q8BQM7 AC167022.1-201ENSMUST00000218647 1458 ntBASIC9.54□□□□□ -0.88
Smco3Q8BQM7 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
Smco3Q8BQM7 Dzip1l-204ENSMUST00000112886 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Smco3Q8BQM7 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Smco3Q8BQM7 C730027H18Rik-201ENSMUST00000218381 2300 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Smco3Q8BQM7 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Smco3Q8BQM7 Muc13-201ENSMUST00000023520 2942 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Smco3Q8BQM7 Acot11-202ENSMUST00000102762 5689 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
Smco3Q8BQM7 Gm18782-201ENSMUST00000209023 1399 ntBASIC9.54□□□□□ -0.88
Smco3Q8BQM7 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Smco3Q8BQM7 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Smco3Q8BQM7 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Smco3Q8BQM7 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
Smco3Q8BQM7 Kcnab2-207ENSMUST00000160884 3922 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
Smco3Q8BQM7 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
Smco3Q8BQM7 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Smco3Q8BQM7 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Smco3Q8BQM7 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Smco3Q8BQM7 Gm9431-201ENSMUST00000119765 1051 ntBASIC9.54□□□□□ -0.88
Smco3Q8BQM7 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Smco3Q8BQM7 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC9.54□□□□□ -0.88
Smco3Q8BQM7 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Smco3Q8BQM7 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
Smco3Q8BQM7 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Smco3Q8BQM7 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Smco3Q8BQM7 Gm8738-201ENSMUST00000172606 329 ntBASIC9.54□□□□□ -0.88
Smco3Q8BQM7 Gm5866-201ENSMUST00000177881 973 ntBASIC9.54□□□□□ -0.88
Smco3Q8BQM7 Gm8494-201ENSMUST00000178171 1233 ntBASIC9.54□□□□□ -0.88
Smco3Q8BQM7 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Smco3Q8BQM7 Gm27437-201ENSMUST00000183429 107 ntBASIC9.54□□□□□ -0.88
Smco3Q8BQM7 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Smco3Q8BQM7 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC9.54□□□□□ -0.88
Smco3Q8BQM7 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Smco3Q8BQM7 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Smco3Q8BQM7 Gm45384-201ENSMUST00000210451 277 ntBASIC9.54□□□□□ -0.88
Smco3Q8BQM7 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC9.54□□□□□ -0.88
Smco3Q8BQM7 Gm5626-201ENSMUST00000222151 1058 ntBASIC9.54□□□□□ -0.88
Smco3Q8BQM7 Gm10268-201ENSMUST00000085340 555 ntBASIC9.54□□□□□ -0.88
Smco3Q8BQM7 Gm29358-202ENSMUST00000187941 3227 ntBASIC9.54□□□□□ -0.88
Smco3Q8BQM7 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Smco3Q8BQM7 Pde2a-201ENSMUST00000163751 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Smco3Q8BQM7 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC9.54□□□□□ -0.88
Smco3Q8BQM7 Dzank1-201ENSMUST00000081982 6847 ntAPPRIS P2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Smco3Q8BQM7 Helz-201ENSMUST00000075012 6218 ntAPPRIS P2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Smco3Q8BQM7 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Smco3Q8BQM7 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Smco3Q8BQM7 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
Smco3Q8BQM7 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Smco3Q8BQM7 Tm9sf1-202ENSMUST00000120041 2164 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Smco3Q8BQM7 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Smco3Q8BQM7 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
Smco3Q8BQM7 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms