Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc40Q8BI79 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC12.21□□□□□ -0.45
Ccdc40Q8BI79 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc40Q8BI79 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ccdc40Q8BI79 Nrg1-213ENSMUST00000208617 2787 ntTSL 5 BASIC12.21□□□□□ -0.46
Ccdc40Q8BI79 Umad1-201ENSMUST00000159168 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ccdc40Q8BI79 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ccdc40Q8BI79 Usp11-201ENSMUST00000033383 3467 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
Ccdc40Q8BI79 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC12.21□□□□□ -0.46
Ccdc40Q8BI79 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ccdc40Q8BI79 Sod3-201ENSMUST00000101208 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ccdc40Q8BI79 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ccdc40Q8BI79 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Ccdc40Q8BI79 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Ccdc40Q8BI79 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc40Q8BI79 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC12.2□□□□□ -0.46
Ccdc40Q8BI79 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc40Q8BI79 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Ccdc40Q8BI79 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc40Q8BI79 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc40Q8BI79 AC093022.4-203ENSMUST00000228523 2657 ntBASIC12.2□□□□□ -0.46
Ccdc40Q8BI79 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC12.2□□□□□ -0.46
Ccdc40Q8BI79 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc40Q8BI79 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC12.2□□□□□ -0.46
Ccdc40Q8BI79 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC12.2□□□□□ -0.46
Ccdc40Q8BI79 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc40Q8BI79 Gm13296-201ENSMUST00000117854 997 ntBASIC12.2□□□□□ -0.46
Ccdc40Q8BI79 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC12.2□□□□□ -0.46
Ccdc40Q8BI79 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc40Q8BI79 Gm27320-201ENSMUST00000184892 109 ntBASIC12.2□□□□□ -0.46
Ccdc40Q8BI79 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC12.2□□□□□ -0.46
Ccdc40Q8BI79 Gm37259-201ENSMUST00000193903 849 ntBASIC12.2□□□□□ -0.46
Ccdc40Q8BI79 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc40Q8BI79 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc40Q8BI79 Gm43962-201ENSMUST00000203898 190 ntBASIC12.2□□□□□ -0.46
Ccdc40Q8BI79 Gm8956-201ENSMUST00000203939 825 ntBASIC12.2□□□□□ -0.46
Ccdc40Q8BI79 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc40Q8BI79 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc40Q8BI79 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc40Q8BI79 AC129931.1-201ENSMUST00000228865 1861 ntBASIC12.2□□□□□ -0.46
Ccdc40Q8BI79 C330027C09Rik-202ENSMUST00000117994 3977 ntTSL 5 BASIC12.2□□□□□ -0.46
Ccdc40Q8BI79 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc40Q8BI79 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Ccdc40Q8BI79 Nek4-207ENSMUST00000228328 4245 ntAPPRIS P2 BASIC12.2□□□□□ -0.46
Ccdc40Q8BI79 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc40Q8BI79 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc40Q8BI79 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC12.2□□□□□ -0.46
Ccdc40Q8BI79 Gm10782-202ENSMUST00000223775 1480 ntBASIC12.2□□□□□ -0.46
Ccdc40Q8BI79 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc40Q8BI79 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc40Q8BI79 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc40Q8BI79 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc40Q8BI79 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Ccdc40Q8BI79 Smpd4-219ENSMUST00000170366 2256 ntTSL 5 BASIC12.2□□□□□ -0.46
Ccdc40Q8BI79 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc40Q8BI79 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc40Q8BI79 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc40Q8BI79 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Ccdc40Q8BI79 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Ccdc40Q8BI79 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc40Q8BI79 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc40Q8BI79 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
Ccdc40Q8BI79 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Ccdc40Q8BI79 Gphb5-201ENSMUST00000051079 1612 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc40Q8BI79 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc40Q8BI79 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc40Q8BI79 Gm26672-201ENSMUST00000180922 2685 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc40Q8BI79 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc40Q8BI79 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Ccdc40Q8BI79 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC12.19□□□□□ -0.46
Ccdc40Q8BI79 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC12.19□□□□□ -0.46
Ccdc40Q8BI79 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc40Q8BI79 Gm22323-201ENSMUST00000103832 109 ntBASIC12.19□□□□□ -0.46
Ccdc40Q8BI79 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC12.19□□□□□ -0.46
Ccdc40Q8BI79 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc40Q8BI79 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc40Q8BI79 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Ccdc40Q8BI79 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC12.19□□□□□ -0.46
Ccdc40Q8BI79 Gm7118-201ENSMUST00000200167 1003 ntBASIC12.19□□□□□ -0.46
Ccdc40Q8BI79 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC12.19□□□□□ -0.46
Ccdc40Q8BI79 AC153954.1-201ENSMUST00000216959 255 ntBASIC12.19□□□□□ -0.46
Ccdc40Q8BI79 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc40Q8BI79 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc40Q8BI79 Gm5455-201ENSMUST00000058710 715 ntBASIC12.19□□□□□ -0.46
Ccdc40Q8BI79 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc40Q8BI79 Gm45089-201ENSMUST00000208082 2040 ntBASIC12.19□□□□□ -0.46
Ccdc40Q8BI79 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc40Q8BI79 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc40Q8BI79 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc40Q8BI79 Aco2-201ENSMUST00000023116 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc40Q8BI79 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC12.19□□□□□ -0.46
Ccdc40Q8BI79 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc40Q8BI79 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Ccdc40Q8BI79 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc40Q8BI79 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc40Q8BI79 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc40Q8BI79 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC12.19□□□□□ -0.46
Ccdc40Q8BI79 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc40Q8BI79 AC091458.1-201ENSMUST00000220902 1361 ntBASIC12.18□□□□□ -0.46
Ccdc40Q8BI79 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms