Protein–RNA interactions for Protein: Q6IRT3

Parpbp, PCNA-interacting partner, mousemouse

Predictions only

Length 573 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ParpbpQ6IRT3 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
ParpbpQ6IRT3 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
ParpbpQ6IRT3 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
ParpbpQ6IRT3 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
ParpbpQ6IRT3 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC10.96□□□□□ -0.66
ParpbpQ6IRT3 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
ParpbpQ6IRT3 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
ParpbpQ6IRT3 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
ParpbpQ6IRT3 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
ParpbpQ6IRT3 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
ParpbpQ6IRT3 Gpr101-201ENSMUST00000057645 5410 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
ParpbpQ6IRT3 Cln8-201ENSMUST00000027554 6857 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
ParpbpQ6IRT3 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
ParpbpQ6IRT3 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
ParpbpQ6IRT3 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
ParpbpQ6IRT3 Gm43172-201ENSMUST00000202139 2137 ntBASIC10.96□□□□□ -0.66
ParpbpQ6IRT3 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC10.96□□□□□ -0.66
ParpbpQ6IRT3 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
ParpbpQ6IRT3 Gm18262-201ENSMUST00000222560 1946 ntBASIC10.96□□□□□ -0.66
ParpbpQ6IRT3 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
ParpbpQ6IRT3 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
ParpbpQ6IRT3 Gm43807-201ENSMUST00000200678 1781 ntBASIC10.95□□□□□ -0.66
ParpbpQ6IRT3 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
ParpbpQ6IRT3 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
ParpbpQ6IRT3 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC10.95□□□□□ -0.66
ParpbpQ6IRT3 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
ParpbpQ6IRT3 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC10.95□□□□□ -0.66
ParpbpQ6IRT3 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
ParpbpQ6IRT3 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
ParpbpQ6IRT3 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC10.95□□□□□ -0.66
ParpbpQ6IRT3 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
ParpbpQ6IRT3 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
ParpbpQ6IRT3 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
ParpbpQ6IRT3 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
ParpbpQ6IRT3 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
ParpbpQ6IRT3 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
ParpbpQ6IRT3 CU062626.3-201ENSMUST00000225522 1411 ntBASIC10.95□□□□□ -0.66
ParpbpQ6IRT3 Manea-201ENSMUST00000041374 4867 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
ParpbpQ6IRT3 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
ParpbpQ6IRT3 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC10.95□□□□□ -0.66
ParpbpQ6IRT3 Gm11660-201ENSMUST00000120955 412 ntBASIC10.95□□□□□ -0.66
ParpbpQ6IRT3 Gm14441-201ENSMUST00000121960 540 ntBASIC10.95□□□□□ -0.66
ParpbpQ6IRT3 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC10.95□□□□□ -0.66
ParpbpQ6IRT3 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
ParpbpQ6IRT3 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
ParpbpQ6IRT3 Gm9034-201ENSMUST00000182071 1005 ntBASIC10.95□□□□□ -0.66
ParpbpQ6IRT3 Gm18038-201ENSMUST00000197900 485 ntBASIC10.95□□□□□ -0.66
ParpbpQ6IRT3 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC10.95□□□□□ -0.66
ParpbpQ6IRT3 Gm19324-201ENSMUST00000213229 1169 ntBASIC10.95□□□□□ -0.66
ParpbpQ6IRT3 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC10.95□□□□□ -0.66
ParpbpQ6IRT3 Gm807-202ENSMUST00000224929 408 ntBASIC10.95□□□□□ -0.66
ParpbpQ6IRT3 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
ParpbpQ6IRT3 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
ParpbpQ6IRT3 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
ParpbpQ6IRT3 Klk1b7-ps-201ENSMUST00000078897 448 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
ParpbpQ6IRT3 Gm26448-201ENSMUST00000082446 203 ntBASIC10.95□□□□□ -0.66
ParpbpQ6IRT3 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
ParpbpQ6IRT3 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
ParpbpQ6IRT3 Gm43984-201ENSMUST00000204572 2864 ntBASIC10.95□□□□□ -0.66
ParpbpQ6IRT3 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
ParpbpQ6IRT3 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
ParpbpQ6IRT3 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
ParpbpQ6IRT3 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC10.95□□□□□ -0.66
ParpbpQ6IRT3 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
ParpbpQ6IRT3 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
ParpbpQ6IRT3 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC10.95□□□□□ -0.66
ParpbpQ6IRT3 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
ParpbpQ6IRT3 Fnbp1l-201ENSMUST00000162409 5198 ntTSL 5 BASIC10.95□□□□□ -0.66
ParpbpQ6IRT3 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC10.95□□□□□ -0.66
ParpbpQ6IRT3 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC10.95□□□□□ -0.66
ParpbpQ6IRT3 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
ParpbpQ6IRT3 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
ParpbpQ6IRT3 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
ParpbpQ6IRT3 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
ParpbpQ6IRT3 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC10.94□□□□□ -0.66
ParpbpQ6IRT3 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC10.94□□□□□ -0.66
ParpbpQ6IRT3 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
ParpbpQ6IRT3 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
ParpbpQ6IRT3 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC10.94□□□□□ -0.66
ParpbpQ6IRT3 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC10.94□□□□□ -0.66
ParpbpQ6IRT3 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
ParpbpQ6IRT3 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC10.94□□□□□ -0.66
ParpbpQ6IRT3 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
ParpbpQ6IRT3 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
ParpbpQ6IRT3 AC154639.1-201ENSMUST00000224393 2849 ntBASIC10.94□□□□□ -0.66
ParpbpQ6IRT3 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
ParpbpQ6IRT3 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
ParpbpQ6IRT3 Gm11509-201ENSMUST00000117358 325 ntBASIC10.94□□□□□ -0.66
ParpbpQ6IRT3 Gm11439-201ENSMUST00000118598 409 ntBASIC10.94□□□□□ -0.66
ParpbpQ6IRT3 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC10.94□□□□□ -0.66
ParpbpQ6IRT3 4930412F09Rik-201ENSMUST00000139006 1017 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
ParpbpQ6IRT3 Gm24990-201ENSMUST00000157406 323 ntBASIC10.94□□□□□ -0.66
ParpbpQ6IRT3 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
ParpbpQ6IRT3 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
ParpbpQ6IRT3 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
ParpbpQ6IRT3 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
ParpbpQ6IRT3 Gm28450-201ENSMUST00000187349 638 ntBASIC10.94□□□□□ -0.66
ParpbpQ6IRT3 Gm38228-201ENSMUST00000193169 1293 ntBASIC10.94□□□□□ -0.66
ParpbpQ6IRT3 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
ParpbpQ6IRT3 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms