Protein–RNA interactions for Protein: Q61602

Gli3, Transcriptional activator GLI3, mousemouse

Predictions only

Length 1,583 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli3Q61602 AC140381.2-201ENSMUST00000217935 1260 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Gli3Q61602 AC114585.2-201ENSMUST00000227693 486 ntBASIC15.26■□□□□ 0.03
Gli3Q61602 Ascl3-201ENSMUST00000035372 700 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gli3Q61602 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gli3Q61602 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC15.26■□□□□ 0.03
Gli3Q61602 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Gli3Q61602 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gli3Q61602 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Gli3Q61602 Gm7841-201ENSMUST00000122108 1629 ntBASIC15.26■□□□□ 0.03
Gli3Q61602 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Gli3Q61602 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gli3Q61602 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Gli3Q61602 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gli3Q61602 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gli3Q61602 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gli3Q61602 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gli3Q61602 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gli3Q61602 Theg-201ENSMUST00000020566 1444 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gli3Q61602 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gli3Q61602 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gli3Q61602 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
Gli3Q61602 Gm13215-201ENSMUST00000117559 472 ntBASIC15.25■□□□□ 0.03
Gli3Q61602 Smt3h2-ps2-201ENSMUST00000122370 288 ntBASIC15.25■□□□□ 0.03
Gli3Q61602 Gm13191-201ENSMUST00000136489 416 ntTSL 3 BASIC15.25■□□□□ 0.03
Gli3Q61602 Gm13857-201ENSMUST00000139645 173 ntBASIC15.25■□□□□ 0.03
Gli3Q61602 Gm12207-201ENSMUST00000143016 494 ntTSL 2 BASIC15.25■□□□□ 0.03
Gli3Q61602 Stamos-201ENSMUST00000152524 801 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Gli3Q61602 Has2os-202ENSMUST00000163314 633 ntTSL 3 BASIC15.25■□□□□ 0.03
Gli3Q61602 Pik3r4-206ENSMUST00000188784 1295 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Gli3Q61602 Gm43122-202ENSMUST00000202259 526 ntTSL 2 BASIC15.25■□□□□ 0.03
Gli3Q61602 Cypt2-201ENSMUST00000041758 697 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gli3Q61602 Gm10617-201ENSMUST00000098368 1172 ntBASIC15.25■□□□□ 0.03
Gli3Q61602 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gli3Q61602 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gli3Q61602 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gli3Q61602 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Gli3Q61602 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gli3Q61602 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gli3Q61602 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gli3Q61602 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC15.25■□□□□ 0.03
Gli3Q61602 Gm29245-201ENSMUST00000187332 1416 ntBASIC15.25■□□□□ 0.03
Gli3Q61602 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gli3Q61602 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gli3Q61602 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Gli3Q61602 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gli3Q61602 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gli3Q61602 Armcx6-201ENSMUST00000052431 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gli3Q61602 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC15.24■□□□□ 0.03
Gli3Q61602 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Gli3Q61602 Dmrtc1b-201ENSMUST00000101324 1200 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gli3Q61602 Dmrtc1b-202ENSMUST00000113609 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gli3Q61602 Gm44805-201ENSMUST00000127648 765 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Gli3Q61602 Gm14145-201ENSMUST00000133385 508 ntTSL 3 BASIC15.24■□□□□ 0.03
Gli3Q61602 Gm14146-201ENSMUST00000155885 508 ntTSL 5 BASIC15.24■□□□□ 0.03
Gli3Q61602 Gm23916-201ENSMUST00000158484 399 ntBASIC15.24■□□□□ 0.03
Gli3Q61602 Tead1-211ENSMUST00000170352 1218 ntTSL 5 BASIC15.24■□□□□ 0.03
Gli3Q61602 Gm9639-201ENSMUST00000172205 678 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Gli3Q61602 Mir6930-201ENSMUST00000183859 68 ntBASIC15.24■□□□□ 0.03
Gli3Q61602 Rce1-203ENSMUST00000224707 1255 ntBASIC15.24■□□□□ 0.03
Gli3Q61602 4933427E13Rik-201ENSMUST00000044347 381 ntTSL 5 BASIC15.24■□□□□ 0.03
Gli3Q61602 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gli3Q61602 Gm45124-201ENSMUST00000206723 2755 ntBASIC15.24■□□□□ 0.03
Gli3Q61602 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Gli3Q61602 Araf-202ENSMUST00000120356 1520 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Gli3Q61602 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
Gli3Q61602 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Gli3Q61602 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gli3Q61602 Gm5421-201ENSMUST00000181698 2354 ntBASIC15.24■□□□□ 0.03
Gli3Q61602 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gli3Q61602 Eddm3b-201ENSMUST00000100645 1412 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gli3Q61602 Slc10a4-202ENSMUST00000201304 1419 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Gli3Q61602 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gli3Q61602 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
Gli3Q61602 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gli3Q61602 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Gli3Q61602 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Gli3Q61602 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Gli3Q61602 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Gli3Q61602 AC110091.3-201ENSMUST00000213406 1304 ntTSL 5 BASIC15.24■□□□□ 0.03
Gli3Q61602 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Gli3Q61602 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gli3Q61602 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gli3Q61602 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gli3Q61602 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Gli3Q61602 Gm12463-201ENSMUST00000118271 849 ntBASIC15.24■□□□□ 0.03
Gli3Q61602 Gm6517-201ENSMUST00000121056 511 ntBASIC15.24■□□□□ 0.03
Gli3Q61602 n-R5s154-201ENSMUST00000122513 108 ntBASIC15.24■□□□□ 0.03
Gli3Q61602 Mir1893-201ENSMUST00000122565 83 ntBASIC15.24■□□□□ 0.03
Gli3Q61602 Gm45591-201ENSMUST00000129058 843 ntTSL 3 BASIC15.24■□□□□ 0.03
Gli3Q61602 Gm15419-201ENSMUST00000148654 743 ntTSL 3 BASIC15.24■□□□□ 0.03
Gli3Q61602 Gm20629-201ENSMUST00000176157 513 ntTSL 3 BASIC15.24■□□□□ 0.03
Gli3Q61602 Gm2021-201ENSMUST00000190623 464 ntBASIC15.24■□□□□ 0.03
Gli3Q61602 Gm45808-201ENSMUST00000210701 789 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Gli3Q61602 Tmem238l-203ENSMUST00000211300 930 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
Gli3Q61602 AC134860.2-201ENSMUST00000225277 1036 ntBASIC15.24■□□□□ 0.03
Gli3Q61602 AC154806.7-201ENSMUST00000227998 202 ntBASIC15.24■□□□□ 0.03
Gli3Q61602 Tmem212-201ENSMUST00000058077 716 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gli3Q61602 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gli3Q61602 Xlr4c-201ENSMUST00000068551 1500 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Gli3Q61602 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 74.6 ms