Protein–RNA interactions for Protein: P70278

Stra8, Stimulated by retinoic acid gene 8 protein, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stra8P70278 AC126257.1-201ENSMUST00000213195 1536 ntBASIC16.04■□□□□ 0.16
Stra8P70278 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Stra8P70278 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Stra8P70278 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Stra8P70278 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Stra8P70278 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Stra8P70278 Pdgfrb-201ENSMUST00000025522 5407 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Stra8P70278 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Stra8P70278 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Stra8P70278 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Stra8P70278 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Stra8P70278 Enam-201ENSMUST00000031222 5483 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Stra8P70278 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Stra8P70278 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC16.04■□□□□ 0.16
Stra8P70278 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Stra8P70278 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Stra8P70278 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Stra8P70278 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Stra8P70278 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Stra8P70278 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Stra8P70278 Ank1-204ENSMUST00000117270 5652 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Stra8P70278 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Stra8P70278 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC16.04■□□□□ 0.16
Stra8P70278 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Stra8P70278 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Stra8P70278 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Stra8P70278 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Stra8P70278 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Stra8P70278 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Stra8P70278 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Stra8P70278 Siglec1-203ENSMUST00000110227 5790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Stra8P70278 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Stra8P70278 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Stra8P70278 Robo1-201ENSMUST00000023600 7563 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Stra8P70278 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Stra8P70278 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
Stra8P70278 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Stra8P70278 AC154537.1-201ENSMUST00000226101 1304 ntBASIC16.03■□□□□ 0.16
Stra8P70278 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Stra8P70278 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Stra8P70278 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Stra8P70278 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC16.03■□□□□ 0.16
Stra8P70278 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Stra8P70278 AC163667.3-201ENSMUST00000225774 222 ntBASIC16.03■□□□□ 0.16
Stra8P70278 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Stra8P70278 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Stra8P70278 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Stra8P70278 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Stra8P70278 Dhx38-201ENSMUST00000042601 4463 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Stra8P70278 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Stra8P70278 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC16.03■□□□□ 0.16
Stra8P70278 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Stra8P70278 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Stra8P70278 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Stra8P70278 Tenm2-201ENSMUST00000057207 8298 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
Stra8P70278 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Stra8P70278 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Stra8P70278 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC16.03■□□□□ 0.16
Stra8P70278 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Stra8P70278 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Stra8P70278 Nf1-202ENSMUST00000108251 9217 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Stra8P70278 Ankrd26-201ENSMUST00000112830 6930 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Stra8P70278 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Stra8P70278 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Stra8P70278 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Stra8P70278 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Stra8P70278 Olfr624-201ENSMUST00000062144 5731 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Stra8P70278 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Stra8P70278 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC16.02■□□□□ 0.16
Stra8P70278 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Stra8P70278 Mical3-217ENSMUST00000207889 9204 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Stra8P70278 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.16
Stra8P70278 Tnxb-201ENSMUST00000087399 12209 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Stra8P70278 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC16.02■□□□□ 0.16
Stra8P70278 Gm36957-201ENSMUST00000192982 2824 ntBASIC16.02■□□□□ 0.16
Stra8P70278 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Stra8P70278 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Stra8P70278 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Stra8P70278 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Stra8P70278 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC16.02■□□□□ 0.16
Stra8P70278 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC16.02■□□□□ 0.16
Stra8P70278 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Stra8P70278 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Stra8P70278 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC16.02■□□□□ 0.16
Stra8P70278 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC16.02■□□□□ 0.16
Stra8P70278 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC16.02■□□□□ 0.16
Stra8P70278 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC16.02■□□□□ 0.16
Stra8P70278 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Stra8P70278 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Stra8P70278 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC16.02■□□□□ 0.15
Stra8P70278 Stx1b-201ENSMUST00000106267 4536 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Stra8P70278 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
Stra8P70278 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Stra8P70278 Myocd-203ENSMUST00000108695 5114 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Stra8P70278 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Stra8P70278 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
Stra8P70278 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Stra8P70278 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC16.01■□□□□ 0.15
Stra8P70278 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Stra8P70278 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC16.01■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms