Protein–RNA interactions for Protein: P62046

Lrch1, Leucine-rich repeat and calponin homology domain-containing protein 1, mousemouse

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrch1P62046 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lrch1P62046 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lrch1P62046 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC13.7□□□□□ -0.22
Lrch1P62046 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lrch1P62046 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lrch1P62046 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Lrch1P62046 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Lrch1P62046 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lrch1P62046 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lrch1P62046 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Lrch1P62046 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC13.69□□□□□ -0.22
Lrch1P62046 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Lrch1P62046 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Lrch1P62046 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lrch1P62046 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lrch1P62046 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Lrch1P62046 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lrch1P62046 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lrch1P62046 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC13.69□□□□□ -0.22
Lrch1P62046 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lrch1P62046 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Lrch1P62046 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lrch1P62046 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lrch1P62046 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC13.69□□□□□ -0.22
Lrch1P62046 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lrch1P62046 Cat-202ENSMUST00000111168 779 ntTSL 3 BASIC13.69□□□□□ -0.22
Lrch1P62046 Tprkb-204ENSMUST00000113752 749 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Lrch1P62046 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Lrch1P62046 Gm15625-201ENSMUST00000117617 1093 ntBASIC13.69□□□□□ -0.22
Lrch1P62046 Gm14052-201ENSMUST00000121434 1031 ntBASIC13.69□□□□□ -0.22
Lrch1P62046 Tspan32os-201ENSMUST00000131740 975 ntTSL 2 BASIC13.69□□□□□ -0.22
Lrch1P62046 Gm9372-201ENSMUST00000168454 430 ntBASIC13.69□□□□□ -0.22
Lrch1P62046 Gm7627-201ENSMUST00000183205 999 ntBASIC13.69□□□□□ -0.22
Lrch1P62046 Gm6644-201ENSMUST00000186507 951 ntBASIC13.69□□□□□ -0.22
Lrch1P62046 Gm45481-201ENSMUST00000209717 877 ntBASIC13.69□□□□□ -0.22
Lrch1P62046 AC153891.1-201ENSMUST00000213761 742 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Lrch1P62046 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC13.69□□□□□ -0.22
Lrch1P62046 4631405J19Rik-201ENSMUST00000099699 1225 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Lrch1P62046 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC13.69□□□□□ -0.22
Lrch1P62046 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Lrch1P62046 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Lrch1P62046 Gm14005-210ENSMUST00000225087 1413 ntBASIC13.69□□□□□ -0.22
Lrch1P62046 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lrch1P62046 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Lrch1P62046 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Lrch1P62046 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Lrch1P62046 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC13.69□□□□□ -0.22
Lrch1P62046 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Lrch1P62046 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Lrch1P62046 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Lrch1P62046 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lrch1P62046 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lrch1P62046 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Lrch1P62046 1500004A13Rik-209ENSMUST00000185189 1659 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Lrch1P62046 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Lrch1P62046 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lrch1P62046 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC13.69□□□□□ -0.22
Lrch1P62046 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lrch1P62046 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC13.68□□□□□ -0.22
Lrch1P62046 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Lrch1P62046 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Lrch1P62046 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lrch1P62046 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Lrch1P62046 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Lrch1P62046 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Lrch1P62046 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Lrch1P62046 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lrch1P62046 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lrch1P62046 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lrch1P62046 Gm2721-201ENSMUST00000222380 1571 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Lrch1P62046 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lrch1P62046 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lrch1P62046 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Lrch1P62046 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Lrch1P62046 Styxl1-203ENSMUST00000111162 726 ntTSL 5 BASIC13.68□□□□□ -0.22
Lrch1P62046 Gm13094-201ENSMUST00000117930 409 ntBASIC13.68□□□□□ -0.22
Lrch1P62046 Gm12337-201ENSMUST00000119634 400 ntBASIC13.68□□□□□ -0.22
Lrch1P62046 Ube2d-ps-201ENSMUST00000121354 441 ntBASIC13.68□□□□□ -0.22
Lrch1P62046 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC13.68□□□□□ -0.22
Lrch1P62046 Gm6548-201ENSMUST00000167498 1165 ntBASIC13.68□□□□□ -0.22
Lrch1P62046 Gm9625-201ENSMUST00000180422 955 ntBASIC13.68□□□□□ -0.22
Lrch1P62046 4933417D19Rik-201ENSMUST00000181432 1229 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Lrch1P62046 Mir7035-201ENSMUST00000184713 82 ntBASIC13.68□□□□□ -0.22
Lrch1P62046 Ndufc1-204ENSMUST00000193279 315 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
Lrch1P62046 Gm6606-201ENSMUST00000193613 947 ntBASIC13.68□□□□□ -0.22
Lrch1P62046 Ube2d3-216ENSMUST00000199613 738 ntAPPRIS P2 TSL 3 BASIC13.68□□□□□ -0.22
Lrch1P62046 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Lrch1P62046 Gm45682-201ENSMUST00000209434 1256 ntTSL 5 BASIC13.68□□□□□ -0.22
Lrch1P62046 Acy1-211ENSMUST00000216400 1030 ntTSL 5 BASIC13.68□□□□□ -0.22
Lrch1P62046 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Lrch1P62046 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Lrch1P62046 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lrch1P62046 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lrch1P62046 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lrch1P62046 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Lrch1P62046 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lrch1P62046 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lrch1P62046 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lrch1P62046 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lrch1P62046 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms