Protein–RNA interactions for Protein: P56183

Rrp1, Ribosomal RNA processing protein 1 homolog A, mousemouse

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1P56183 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rrp1P56183 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Rrp1P56183 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Rrp1P56183 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Rrp1P56183 Gm14109-201ENSMUST00000118814 309 ntBASIC13.09□□□□□ -0.31
Rrp1P56183 Gm13350-201ENSMUST00000120519 479 ntBASIC13.09□□□□□ -0.31
Rrp1P56183 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Rrp1P56183 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Rrp1P56183 Gm3329-201ENSMUST00000159873 556 ntBASIC13.09□□□□□ -0.31
Rrp1P56183 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC13.09□□□□□ -0.31
Rrp1P56183 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC13.09□□□□□ -0.31
Rrp1P56183 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Rrp1P56183 Gm31256-201ENSMUST00000194705 506 ntBASIC13.09□□□□□ -0.31
Rrp1P56183 Gm5982-201ENSMUST00000196234 512 ntBASIC13.09□□□□□ -0.31
Rrp1P56183 Gm6450-201ENSMUST00000200896 574 ntBASIC13.09□□□□□ -0.31
Rrp1P56183 Gm7783-201ENSMUST00000204795 781 ntBASIC13.09□□□□□ -0.31
Rrp1P56183 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Rrp1P56183 Gm45865-201ENSMUST00000211815 945 ntBASIC13.09□□□□□ -0.31
Rrp1P56183 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC13.09□□□□□ -0.31
Rrp1P56183 Gm2553-201ENSMUST00000215986 605 ntBASIC13.09□□□□□ -0.31
Rrp1P56183 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC13.09□□□□□ -0.31
Rrp1P56183 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rrp1P56183 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Rrp1P56183 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rrp1P56183 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rrp1P56183 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rrp1P56183 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rrp1P56183 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Rrp1P56183 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rrp1P56183 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Rrp1P56183 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rrp1P56183 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC13.09□□□□□ -0.31
Rrp1P56183 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rrp1P56183 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Rrp1P56183 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Rrp1P56183 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Rrp1P56183 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rrp1P56183 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rrp1P56183 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Rrp1P56183 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rrp1P56183 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rrp1P56183 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC13.08□□□□□ -0.31
Rrp1P56183 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Rrp1P56183 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC13.08□□□□□ -0.31
Rrp1P56183 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Rrp1P56183 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Rrp1P56183 Gm6157-201ENSMUST00000199935 1897 ntBASIC13.08□□□□□ -0.32
Rrp1P56183 Gm44573-201ENSMUST00000191753 2370 ntBASIC13.08□□□□□ -0.32
Rrp1P56183 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rrp1P56183 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Rrp1P56183 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rrp1P56183 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rrp1P56183 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rrp1P56183 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC13.08□□□□□ -0.32
Rrp1P56183 Gm15991-202ENSMUST00000212123 3565 ntBASIC13.08□□□□□ -0.32
Rrp1P56183 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rrp1P56183 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rrp1P56183 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Rrp1P56183 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rrp1P56183 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC13.08□□□□□ -0.32
Rrp1P56183 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC13.08□□□□□ -0.32
Rrp1P56183 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Rrp1P56183 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rrp1P56183 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Rrp1P56183 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rrp1P56183 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Rrp1P56183 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Rrp1P56183 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Rrp1P56183 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
Rrp1P56183 Gm14726-201ENSMUST00000120623 896 ntBASIC13.08□□□□□ -0.32
Rrp1P56183 Gm14381-201ENSMUST00000122105 414 ntBASIC13.08□□□□□ -0.32
Rrp1P56183 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Rrp1P56183 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC13.08□□□□□ -0.32
Rrp1P56183 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rrp1P56183 Gm29164-201ENSMUST00000185454 1024 ntBASIC13.08□□□□□ -0.32
Rrp1P56183 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC13.08□□□□□ -0.32
Rrp1P56183 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Rrp1P56183 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC13.08□□□□□ -0.32
Rrp1P56183 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC13.08□□□□□ -0.32
Rrp1P56183 CT025533.2-201ENSMUST00000228715 1248 ntBASIC13.08□□□□□ -0.32
Rrp1P56183 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rrp1P56183 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rrp1P56183 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rrp1P56183 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Rrp1P56183 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rrp1P56183 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Rrp1P56183 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Rrp1P56183 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Rrp1P56183 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rrp1P56183 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC13.08□□□□□ -0.32
Rrp1P56183 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Rrp1P56183 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Rrp1P56183 AC167565.1-201ENSMUST00000226980 1833 ntBASIC13.08□□□□□ -0.32
Rrp1P56183 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC13.08□□□□□ -0.32
Rrp1P56183 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
Rrp1P56183 AC159195.3-201ENSMUST00000225162 2211 ntBASIC13.08□□□□□ -0.32
Rrp1P56183 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rrp1P56183 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rrp1P56183 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Rrp1P56183 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms