Protein–RNA interactions for Protein: P54846

Nrl, Neural retina-specific leucine zipper protein, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NrlP54846 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
NrlP54846 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
NrlP54846 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
NrlP54846 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
NrlP54846 Gm9796-201ENSMUST00000062249 2250 ntBASIC12.39□□□□□ -0.43
NrlP54846 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
NrlP54846 Gm25063-201ENSMUST00000104666 94 ntBASIC12.39□□□□□ -0.43
NrlP54846 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
NrlP54846 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
NrlP54846 Gm26047-201ENSMUST00000157308 113 ntBASIC12.39□□□□□ -0.43
NrlP54846 Gm15744-201ENSMUST00000161734 213 ntBASIC12.39□□□□□ -0.43
NrlP54846 Gm28937-201ENSMUST00000185413 695 ntBASIC12.39□□□□□ -0.43
NrlP54846 Gm29400-201ENSMUST00000187208 695 ntBASIC12.39□□□□□ -0.43
NrlP54846 Gm28662-201ENSMUST00000188446 695 ntBASIC12.39□□□□□ -0.43
NrlP54846 Gm28251-201ENSMUST00000188835 695 ntBASIC12.39□□□□□ -0.43
NrlP54846 Gm37318-201ENSMUST00000194325 695 ntBASIC12.39□□□□□ -0.43
NrlP54846 Gm38017-201ENSMUST00000194768 695 ntBASIC12.39□□□□□ -0.43
NrlP54846 D8Ertd738e-201ENSMUST00000019506 616 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
NrlP54846 Gm37287-201ENSMUST00000195449 695 ntBASIC12.39□□□□□ -0.43
NrlP54846 Gm37793-201ENSMUST00000195548 695 ntBASIC12.39□□□□□ -0.43
NrlP54846 Gm26047-202ENSMUST00000198840 115 ntBASIC12.39□□□□□ -0.43
NrlP54846 Gm42599-201ENSMUST00000201308 469 ntBASIC12.39□□□□□ -0.43
NrlP54846 Gm44315-201ENSMUST00000203041 219 ntBASIC12.39□□□□□ -0.43
NrlP54846 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC12.39□□□□□ -0.43
NrlP54846 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
NrlP54846 AC165154.1-201ENSMUST00000226661 340 ntBASIC12.39□□□□□ -0.43
NrlP54846 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
NrlP54846 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
NrlP54846 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
NrlP54846 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
NrlP54846 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
NrlP54846 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
NrlP54846 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
NrlP54846 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
NrlP54846 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
NrlP54846 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
NrlP54846 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
NrlP54846 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
NrlP54846 Gm44241-201ENSMUST00000203230 1662 ntBASIC12.38□□□□□ -0.43
NrlP54846 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
NrlP54846 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
NrlP54846 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
NrlP54846 Gm7278-201ENSMUST00000119836 1401 ntBASIC12.38□□□□□ -0.43
NrlP54846 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
NrlP54846 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
NrlP54846 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
NrlP54846 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
NrlP54846 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
NrlP54846 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
NrlP54846 Gm25766-201ENSMUST00000104101 131 ntBASIC12.38□□□□□ -0.43
NrlP54846 Ywhaq-ps2-201ENSMUST00000117738 643 ntBASIC12.38□□□□□ -0.43
NrlP54846 Gm14219-201ENSMUST00000120414 288 ntBASIC12.38□□□□□ -0.43
NrlP54846 Gm9089-201ENSMUST00000122027 526 ntBASIC12.38□□□□□ -0.43
NrlP54846 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC12.38□□□□□ -0.43
NrlP54846 Gm8459-201ENSMUST00000162504 760 ntBASIC12.38□□□□□ -0.43
NrlP54846 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
NrlP54846 Gm29410-201ENSMUST00000188383 694 ntBASIC12.38□□□□□ -0.43
NrlP54846 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
NrlP54846 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC12.38□□□□□ -0.43
NrlP54846 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
NrlP54846 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
NrlP54846 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC12.38□□□□□ -0.43
NrlP54846 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
NrlP54846 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC12.38□□□□□ -0.43
NrlP54846 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
NrlP54846 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
NrlP54846 Dclk1-215ENSMUST00000200352 1662 ntTSL 2 BASIC12.38□□□□□ -0.43
NrlP54846 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC12.38□□□□□ -0.43
NrlP54846 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
NrlP54846 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
NrlP54846 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
NrlP54846 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC12.38□□□□□ -0.43
NrlP54846 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
NrlP54846 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
NrlP54846 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
NrlP54846 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
NrlP54846 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
NrlP54846 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
NrlP54846 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
NrlP54846 Pck2-205ENSMUST00000226352 2784 ntBASIC12.37□□□□□ -0.43
NrlP54846 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
NrlP54846 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
NrlP54846 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
NrlP54846 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
NrlP54846 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
NrlP54846 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
NrlP54846 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
NrlP54846 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
NrlP54846 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
NrlP54846 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
NrlP54846 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
NrlP54846 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
NrlP54846 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
NrlP54846 Gm42943-201ENSMUST00000199676 3242 ntBASIC12.37□□□□□ -0.43
NrlP54846 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
NrlP54846 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC12.37□□□□□ -0.43
NrlP54846 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC12.37□□□□□ -0.43
NrlP54846 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC12.37□□□□□ -0.43
NrlP54846 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC12.37□□□□□ -0.43
NrlP54846 Gm10807-201ENSMUST00000177134 795 ntBASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 70.4 ms