Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Atxn1P54254 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Atxn1P54254 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Atxn1P54254 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Atxn1P54254 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Atxn1P54254 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Atxn1P54254 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Atxn1P54254 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Atxn1P54254 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Atxn1P54254 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Atxn1P54254 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Atxn1P54254 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Atxn1P54254 Ndufaf1-203ENSMUST00000110802 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Atxn1P54254 Gm44260-201ENSMUST00000204946 2094 ntBASIC11.59□□□□□ -0.55
Atxn1P54254 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Atxn1P54254 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Atxn1P54254 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Atxn1P54254 Etv1-205ENSMUST00000160856 1474 ntTSL 5 BASIC11.59□□□□□ -0.55
Atxn1P54254 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Atxn1P54254 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Atxn1P54254 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Atxn1P54254 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Atxn1P54254 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Atxn1P54254 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC11.59□□□□□ -0.55
Atxn1P54254 AC126262.1-201ENSMUST00000221802 1904 ntBASIC11.59□□□□□ -0.55
Atxn1P54254 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC11.59□□□□□ -0.55
Atxn1P54254 Gm10728-201ENSMUST00000194292 1829 ntBASIC11.59□□□□□ -0.55
Atxn1P54254 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Atxn1P54254 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC11.59□□□□□ -0.55
Atxn1P54254 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC11.59□□□□□ -0.55
Atxn1P54254 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Atxn1P54254 Crygc-202ENSMUST00000114064 612 ntAPPRIS ALT1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Atxn1P54254 Gm13351-201ENSMUST00000118087 414 ntBASIC11.59□□□□□ -0.55
Atxn1P54254 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC11.59□□□□□ -0.55
Atxn1P54254 Zfp667-204ENSMUST00000153840 596 ntTSL 3 BASIC11.59□□□□□ -0.55
Atxn1P54254 Fxyd5-209ENSMUST00000162087 762 ntAPPRIS P3 TSL 3 BASIC11.59□□□□□ -0.55
Atxn1P54254 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
Atxn1P54254 Gm9507-202ENSMUST00000180157 654 ntBASIC11.59□□□□□ -0.55
Atxn1P54254 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC11.59□□□□□ -0.55
Atxn1P54254 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC11.59□□□□□ -0.55
Atxn1P54254 Gm8956-201ENSMUST00000203939 825 ntBASIC11.59□□□□□ -0.55
Atxn1P54254 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Atxn1P54254 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
Atxn1P54254 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Atxn1P54254 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Atxn1P54254 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Atxn1P54254 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Atxn1P54254 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Atxn1P54254 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Atxn1P54254 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Atxn1P54254 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Atxn1P54254 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Atxn1P54254 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Atxn1P54254 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC11.59□□□□□ -0.55
Atxn1P54254 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Atxn1P54254 Gm13910-201ENSMUST00000121752 1428 ntBASIC11.59□□□□□ -0.55
Atxn1P54254 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC11.59□□□□□ -0.55
Atxn1P54254 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Atxn1P54254 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Atxn1P54254 AC154517.2-201ENSMUST00000220829 2458 ntBASIC11.59□□□□□ -0.55
Atxn1P54254 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Atxn1P54254 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
Atxn1P54254 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.55
Atxn1P54254 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
Atxn1P54254 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Atxn1P54254 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Atxn1P54254 Gm5641-201ENSMUST00000091130 1488 ntBASIC11.58□□□□□ -0.56
Atxn1P54254 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Atxn1P54254 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Atxn1P54254 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC11.58□□□□□ -0.56
Atxn1P54254 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Atxn1P54254 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Atxn1P54254 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Atxn1P54254 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Atxn1P54254 Gm25766-201ENSMUST00000104101 131 ntBASIC11.58□□□□□ -0.56
Atxn1P54254 Gm22711-201ENSMUST00000116890 133 ntBASIC11.58□□□□□ -0.56
Atxn1P54254 Gm12453-201ENSMUST00000121981 331 ntBASIC11.58□□□□□ -0.56
Atxn1P54254 Apobr-203ENSMUST00000137646 457 ntAPPRIS ALT2 TSL 2 BASIC11.58□□□□□ -0.56
Atxn1P54254 Gm13965-201ENSMUST00000154834 576 ntTSL 3 BASIC11.58□□□□□ -0.56
Atxn1P54254 Gm23119-201ENSMUST00000158610 140 ntBASIC11.58□□□□□ -0.56
Atxn1P54254 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC11.58□□□□□ -0.56
Atxn1P54254 Gm26134-201ENSMUST00000178484 110 ntBASIC11.58□□□□□ -0.56
Atxn1P54254 B230110C06Rik-201ENSMUST00000181388 1274 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Atxn1P54254 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC11.58□□□□□ -0.56
Atxn1P54254 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC11.58□□□□□ -0.56
Atxn1P54254 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Atxn1P54254 Ftl1-204ENSMUST00000210864 503 ntTSL 5 BASIC11.58□□□□□ -0.56
Atxn1P54254 Gm18514-201ENSMUST00000218980 436 ntBASIC11.58□□□□□ -0.56
Atxn1P54254 Gpr137b-ps-202ENSMUST00000220647 1159 ntBASIC11.58□□□□□ -0.56
Atxn1P54254 AC113282.2-201ENSMUST00000224012 945 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Atxn1P54254 AC113282.3-201ENSMUST00000224757 942 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Atxn1P54254 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Atxn1P54254 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Atxn1P54254 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Atxn1P54254 Hddc3-201ENSMUST00000032747 1510 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Atxn1P54254 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC11.58□□□□□ -0.56
Atxn1P54254 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Atxn1P54254 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC11.58□□□□□ -0.56
Atxn1P54254 Gm8038-201ENSMUST00000164674 2044 ntBASIC11.58□□□□□ -0.56
Atxn1P54254 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 102.3 ms