Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Gm43051-201ENSMUST00000201096 2678 ntBASIC11.62□□□□□ -0.55
Nckap1P28660 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Nckap1P28660 AC166836.1-201ENSMUST00000219933 1795 ntBASIC11.62□□□□□ -0.55
Nckap1P28660 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nckap1P28660 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nckap1P28660 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nckap1P28660 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nckap1P28660 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC11.61□□□□□ -0.55
Nckap1P28660 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nckap1P28660 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Nckap1P28660 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nckap1P28660 Gm44758-201ENSMUST00000206096 2068 ntBASIC11.61□□□□□ -0.55
Nckap1P28660 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nckap1P28660 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nckap1P28660 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nckap1P28660 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Nckap1P28660 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nckap1P28660 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Nckap1P28660 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC11.61□□□□□ -0.55
Nckap1P28660 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nckap1P28660 Col6a4-201ENSMUST00000121963 7371 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Nckap1P28660 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nckap1P28660 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC11.61□□□□□ -0.55
Nckap1P28660 Gm15172-201ENSMUST00000118945 1046 ntBASIC11.61□□□□□ -0.55
Nckap1P28660 Gm14942-201ENSMUST00000119642 336 ntBASIC11.61□□□□□ -0.55
Nckap1P28660 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC11.61□□□□□ -0.55
Nckap1P28660 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Nckap1P28660 Gm10807-201ENSMUST00000177134 795 ntBASIC11.61□□□□□ -0.55
Nckap1P28660 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nckap1P28660 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nckap1P28660 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Nckap1P28660 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
Nckap1P28660 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC11.61□□□□□ -0.55
Nckap1P28660 Gm9136-201ENSMUST00000193368 454 ntBASIC11.61□□□□□ -0.55
Nckap1P28660 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC11.61□□□□□ -0.55
Nckap1P28660 Gm8574-201ENSMUST00000203207 924 ntBASIC11.61□□□□□ -0.55
Nckap1P28660 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nckap1P28660 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nckap1P28660 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nckap1P28660 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Nckap1P28660 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nckap1P28660 AC122291.1-201ENSMUST00000228937 5748 ntBASIC11.61□□□□□ -0.55
Nckap1P28660 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Nckap1P28660 Wipf2-201ENSMUST00000037480 7011 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nckap1P28660 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nckap1P28660 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nckap1P28660 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC11.61□□□□□ -0.55
Nckap1P28660 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Nckap1P28660 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nckap1P28660 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Nckap1P28660 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nckap1P28660 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Nckap1P28660 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Nckap1P28660 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Nckap1P28660 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nckap1P28660 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nckap1P28660 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nckap1P28660 Ly75-201ENSMUST00000028362 5172 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nckap1P28660 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC11.6□□□□□ -0.55
Nckap1P28660 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nckap1P28660 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nckap1P28660 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Nckap1P28660 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC11.6□□□□□ -0.55
Nckap1P28660 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nckap1P28660 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nckap1P28660 Gm25076-201ENSMUST00000104098 132 ntBASIC11.6□□□□□ -0.55
Nckap1P28660 Gm26013-201ENSMUST00000104404 119 ntBASIC11.6□□□□□ -0.55
Nckap1P28660 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC11.6□□□□□ -0.55
Nckap1P28660 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Nckap1P28660 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC11.6□□□□□ -0.55
Nckap1P28660 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nckap1P28660 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Nckap1P28660 Gm7741-201ENSMUST00000181445 989 ntBASIC11.6□□□□□ -0.55
Nckap1P28660 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC11.6□□□□□ -0.55
Nckap1P28660 Gm43520-201ENSMUST00000197996 164 ntBASIC11.6□□□□□ -0.55
Nckap1P28660 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC11.6□□□□□ -0.55
Nckap1P28660 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC11.6□□□□□ -0.55
Nckap1P28660 AC132901.1-201ENSMUST00000224345 508 ntBASIC11.6□□□□□ -0.55
Nckap1P28660 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nckap1P28660 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Nckap1P28660 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC11.6□□□□□ -0.55
Nckap1P28660 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nckap1P28660 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nckap1P28660 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nckap1P28660 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nckap1P28660 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Nckap1P28660 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Nckap1P28660 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC11.6□□□□□ -0.55
Nckap1P28660 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nckap1P28660 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nckap1P28660 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC11.6□□□□□ -0.55
Nckap1P28660 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Nckap1P28660 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC11.6□□□□□ -0.55
Nckap1P28660 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nckap1P28660 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nckap1P28660 Nupl1-206ENSMUST00000225111 2936 ntBASIC11.59□□□□□ -0.55
Nckap1P28660 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nckap1P28660 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nckap1P28660 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nckap1P28660 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 81.7 ms