Protein–RNA interactions for Protein: P28653

Bgn, Biglycan, mousemouse

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BgnP28653 Gm38115-201ENSMUST00000194317 2413 ntTSL 5 BASIC10.73□□□□□ -0.69
BgnP28653 Mknk2-201ENSMUST00000003433 3065 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
BgnP28653 Pml-202ENSMUST00000114136 4343 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
BgnP28653 Adam8-202ENSMUST00000106069 3117 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
BgnP28653 Adam8-201ENSMUST00000026546 3100 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
BgnP28653 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
BgnP28653 Mup-ps23-201ENSMUST00000118063 630 ntBASIC10.73□□□□□ -0.69
BgnP28653 Gm13875-201ENSMUST00000120162 282 ntBASIC10.73□□□□□ -0.69
BgnP28653 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC10.73□□□□□ -0.69
BgnP28653 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC10.73□□□□□ -0.69
BgnP28653 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
BgnP28653 Gm27839-201ENSMUST00000184242 106 ntBASIC10.73□□□□□ -0.69
BgnP28653 Gm28882-201ENSMUST00000185504 314 ntBASIC10.73□□□□□ -0.69
BgnP28653 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
BgnP28653 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
BgnP28653 Gm7619-201ENSMUST00000210649 1282 ntBASIC10.73□□□□□ -0.69
BgnP28653 Gm19994-201ENSMUST00000217086 586 ntBASIC10.73□□□□□ -0.69
BgnP28653 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC10.73□□□□□ -0.69
BgnP28653 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC10.73□□□□□ -0.69
BgnP28653 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
BgnP28653 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
BgnP28653 Gm6091-201ENSMUST00000098307 165 ntBASIC10.73□□□□□ -0.69
BgnP28653 Ehd2-201ENSMUST00000098799 5119 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
BgnP28653 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
BgnP28653 Atxn7l1-204ENSMUST00000125192 2644 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
BgnP28653 Rbbp5-202ENSMUST00000187505 1977 ntTSL 5 BASIC10.73□□□□□ -0.69
BgnP28653 Gm43579-201ENSMUST00000202387 1307 ntBASIC10.73□□□□□ -0.69
BgnP28653 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
BgnP28653 Slc4a9-201ENSMUST00000074298 2714 ntAPPRIS P3 TSL 5 BASIC10.73□□□□□ -0.69
BgnP28653 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
BgnP28653 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
BgnP28653 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
BgnP28653 Colq-201ENSMUST00000112027 2837 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
BgnP28653 Usp2-203ENSMUST00000114830 2122 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
BgnP28653 Jmjd4-201ENSMUST00000045279 4315 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
BgnP28653 Sirpa-201ENSMUST00000049262 3644 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
BgnP28653 Pla2g6-203ENSMUST00000172403 2943 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
BgnP28653 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC10.73□□□□□ -0.69
BgnP28653 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
BgnP28653 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
BgnP28653 Fibcd1-201ENSMUST00000028188 4751 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
BgnP28653 Tifa-205ENSMUST00000171621 2547 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
BgnP28653 Gm13652-201ENSMUST00000143898 3412 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
BgnP28653 Ippk-202ENSMUST00000220447 4421 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
BgnP28653 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
BgnP28653 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
BgnP28653 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
BgnP28653 Slc10a7-201ENSMUST00000034111 3595 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
BgnP28653 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
BgnP28653 Specc1l-204ENSMUST00000218766 4725 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
BgnP28653 Col20a1-202ENSMUST00000149179 3867 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
BgnP28653 Ap1b1-201ENSMUST00000009234 4085 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
BgnP28653 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
BgnP28653 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
BgnP28653 Il1rap-202ENSMUST00000096129 4438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
BgnP28653 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
BgnP28653 Plcd4-205ENSMUST00000113749 4648 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
BgnP28653 Gm11033-203ENSMUST00000156185 2321 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
BgnP28653 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
BgnP28653 Gm12058-201ENSMUST00000118614 437 ntBASIC10.72□□□□□ -0.69
BgnP28653 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC10.72□□□□□ -0.69
BgnP28653 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
BgnP28653 Gm14928-201ENSMUST00000120198 477 ntBASIC10.72□□□□□ -0.69
BgnP28653 Gm7722-201ENSMUST00000120646 741 ntBASIC10.72□□□□□ -0.69
BgnP28653 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC10.72□□□□□ -0.69
BgnP28653 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC10.72□□□□□ -0.69
BgnP28653 Gm5866-201ENSMUST00000177881 973 ntBASIC10.72□□□□□ -0.69
BgnP28653 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
BgnP28653 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
BgnP28653 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC10.72□□□□□ -0.69
BgnP28653 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC10.72□□□□□ -0.69
BgnP28653 AC166095.1-201ENSMUST00000223731 1241 ntBASIC10.72□□□□□ -0.69
BgnP28653 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
BgnP28653 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
BgnP28653 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
BgnP28653 Gm9996-201ENSMUST00000070359 913 ntBASIC10.72□□□□□ -0.69
BgnP28653 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
BgnP28653 Med17-201ENSMUST00000034411 3964 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
BgnP28653 Trp53inp2-201ENSMUST00000043237 3979 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
BgnP28653 Rpgrip1-202ENSMUST00000111603 5380 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
BgnP28653 Myo9a-205ENSMUST00000135298 12198 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
BgnP28653 Gm43127-201ENSMUST00000195890 2789 ntBASIC10.72□□□□□ -0.69
BgnP28653 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
BgnP28653 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
BgnP28653 Fdft1-201ENSMUST00000054963 2860 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
BgnP28653 Ctnnd1-204ENSMUST00000099941 5783 ntTSL 5 BASIC10.72□□□□□ -0.69
BgnP28653 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
BgnP28653 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
BgnP28653 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
BgnP28653 Loxhd1-202ENSMUST00000096547 6595 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
BgnP28653 Tln2-205ENSMUST00000215267 4999 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
BgnP28653 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC10.72□□□□□ -0.69
BgnP28653 Flcn-203ENSMUST00000102697 3437 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
BgnP28653 Gfra2-201ENSMUST00000022699 3472 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
BgnP28653 Camk2g-201ENSMUST00000071816 3703 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
BgnP28653 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
BgnP28653 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
BgnP28653 AC207128.2-201ENSMUST00000223708 1924 ntBASIC10.72□□□□□ -0.69
BgnP28653 Oplah-201ENSMUST00000023222 3970 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
BgnP28653 Rad1-202ENSMUST00000100775 4085 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms