Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC10.79□□□□□ -0.68
Cd40lgP27548 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC10.79□□□□□ -0.68
Cd40lgP27548 Gm807-202ENSMUST00000224929 408 ntBASIC10.79□□□□□ -0.68
Cd40lgP27548 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cd40lgP27548 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Cd40lgP27548 Gm28719-201ENSMUST00000187779 1757 ntBASIC10.79□□□□□ -0.68
Cd40lgP27548 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC10.79□□□□□ -0.68
Cd40lgP27548 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC10.79□□□□□ -0.68
Cd40lgP27548 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Cd40lgP27548 AC122811.1-201ENSMUST00000222257 2921 ntBASIC10.79□□□□□ -0.68
Cd40lgP27548 Adgrl3-217ENSMUST00000121707 6690 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Cd40lgP27548 Zbtb21-203ENSMUST00000113734 6010 ntAPPRIS P4 TSL 2 BASIC10.79□□□□□ -0.68
Cd40lgP27548 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC10.79□□□□□ -0.68
Cd40lgP27548 Gpr146-203ENSMUST00000100514 4264 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cd40lgP27548 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cd40lgP27548 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Cd40lgP27548 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cd40lgP27548 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Cd40lgP27548 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cd40lgP27548 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cd40lgP27548 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cd40lgP27548 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cd40lgP27548 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Cd40lgP27548 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cd40lgP27548 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Cd40lgP27548 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cd40lgP27548 AC126257.1-201ENSMUST00000213195 1536 ntBASIC10.79□□□□□ -0.68
Cd40lgP27548 Gtf3c2-201ENSMUST00000088010 4552 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cd40lgP27548 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cd40lgP27548 Gm37368-201ENSMUST00000193173 3212 ntBASIC10.79□□□□□ -0.68
Cd40lgP27548 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cd40lgP27548 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Cd40lgP27548 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cd40lgP27548 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Cd40lgP27548 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cd40lgP27548 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Cd40lgP27548 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cd40lgP27548 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Cd40lgP27548 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC10.78□□□□□ -0.68
Cd40lgP27548 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC10.78□□□□□ -0.68
Cd40lgP27548 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC10.78□□□□□ -0.68
Cd40lgP27548 Gm7857-201ENSMUST00000117957 358 ntBASIC10.78□□□□□ -0.68
Cd40lgP27548 Gm4909-201ENSMUST00000118749 794 ntBASIC10.78□□□□□ -0.68
Cd40lgP27548 Gm12217-201ENSMUST00000118858 696 ntBASIC10.78□□□□□ -0.68
Cd40lgP27548 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Cd40lgP27548 Gm270-201ENSMUST00000223010 976 ntBASIC10.78□□□□□ -0.68
Cd40lgP27548 AC121960.1-201ENSMUST00000227982 564 ntBASIC10.78□□□□□ -0.68
Cd40lgP27548 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Cd40lgP27548 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC10.78□□□□□ -0.68
Cd40lgP27548 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cd40lgP27548 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cd40lgP27548 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cd40lgP27548 Pofut1-207ENSMUST00000152390 4833 ntTSL 2 BASIC10.78□□□□□ -0.68
Cd40lgP27548 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cd40lgP27548 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cd40lgP27548 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cd40lgP27548 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cd40lgP27548 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cd40lgP27548 Gm9333-201ENSMUST00000205452 1323 ntBASIC10.78□□□□□ -0.68
Cd40lgP27548 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cd40lgP27548 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cd40lgP27548 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cd40lgP27548 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cd40lgP27548 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cd40lgP27548 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cd40lgP27548 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Cd40lgP27548 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC10.77□□□□□ -0.68
Cd40lgP27548 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC10.77□□□□□ -0.68
Cd40lgP27548 Rere-202ENSMUST00000105682 7728 ntAPPRIS P2 TSL 5 BASIC10.77□□□□□ -0.68
Cd40lgP27548 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Cd40lgP27548 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Cd40lgP27548 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Cd40lgP27548 Gm8038-201ENSMUST00000164674 2044 ntBASIC10.77□□□□□ -0.68
Cd40lgP27548 Dhx38-201ENSMUST00000042601 4463 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Cd40lgP27548 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Cd40lgP27548 Myh9-201ENSMUST00000016771 7433 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cd40lgP27548 Prdm16-203ENSMUST00000097759 8544 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Cd40lgP27548 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Cd40lgP27548 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cd40lgP27548 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Cd40lgP27548 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cd40lgP27548 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC10.77□□□□□ -0.69
Cd40lgP27548 Col6a3-201ENSMUST00000056925 10106 ntTSL 5 BASIC10.77□□□□□ -0.69
Cd40lgP27548 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cd40lgP27548 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC10.77□□□□□ -0.69
Cd40lgP27548 Gm14247-201ENSMUST00000120950 237 ntBASIC10.77□□□□□ -0.69
Cd40lgP27548 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC10.77□□□□□ -0.69
Cd40lgP27548 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC10.77□□□□□ -0.69
Cd40lgP27548 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
Cd40lgP27548 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Cd40lgP27548 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC10.77□□□□□ -0.69
Cd40lgP27548 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Cd40lgP27548 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Cd40lgP27548 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Cd40lgP27548 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Cd40lgP27548 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC10.77□□□□□ -0.69
Cd40lgP27548 AC155637.1-201ENSMUST00000218560 636 ntBASIC10.77□□□□□ -0.69
Cd40lgP27548 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Cd40lgP27548 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Cd40lgP27548 Slc6a2-201ENSMUST00000072939 6187 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 97.1 ms