Protein–RNA interactions for Protein: P25119

Tnfrsf1b, Tumor necrosis factor receptor superfamily member 1B, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1bP25119 Gm18827-201ENSMUST00000188341 790 ntBASIC10.8□□□□□ -0.68
Tnfrsf1bP25119 Gm7430-201ENSMUST00000193824 1144 ntBASIC10.8□□□□□ -0.68
Tnfrsf1bP25119 Gm38151-201ENSMUST00000195085 289 ntBASIC10.8□□□□□ -0.68
Tnfrsf1bP25119 Gm5982-201ENSMUST00000196234 512 ntBASIC10.8□□□□□ -0.68
Tnfrsf1bP25119 Gm43138-201ENSMUST00000199123 708 ntBASIC10.8□□□□□ -0.68
Tnfrsf1bP25119 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC10.8□□□□□ -0.68
Tnfrsf1bP25119 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Tnfrsf1bP25119 Rnase9-201ENSMUST00000064214 1189 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tnfrsf1bP25119 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tnfrsf1bP25119 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Tnfrsf1bP25119 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tnfrsf1bP25119 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Tnfrsf1bP25119 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tnfrsf1bP25119 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tnfrsf1bP25119 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Tnfrsf1bP25119 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tnfrsf1bP25119 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tnfrsf1bP25119 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Tnfrsf1bP25119 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Tnfrsf1bP25119 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tnfrsf1bP25119 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Tnfrsf1bP25119 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tnfrsf1bP25119 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Tnfrsf1bP25119 Gm43289-201ENSMUST00000200537 1475 ntBASIC10.8□□□□□ -0.68
Tnfrsf1bP25119 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Tnfrsf1bP25119 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tnfrsf1bP25119 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tnfrsf1bP25119 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tnfrsf1bP25119 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tnfrsf1bP25119 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tnfrsf1bP25119 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tnfrsf1bP25119 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tnfrsf1bP25119 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
Tnfrsf1bP25119 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tnfrsf1bP25119 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC10.79□□□□□ -0.68
Tnfrsf1bP25119 Mypopos-202ENSMUST00000205975 2321 ntBASIC10.79□□□□□ -0.68
Tnfrsf1bP25119 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tnfrsf1bP25119 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tnfrsf1bP25119 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
Tnfrsf1bP25119 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Tnfrsf1bP25119 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tnfrsf1bP25119 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tnfrsf1bP25119 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tnfrsf1bP25119 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tnfrsf1bP25119 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tnfrsf1bP25119 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Tnfrsf1bP25119 Gm12165-201ENSMUST00000117047 342 ntBASIC10.79□□□□□ -0.68
Tnfrsf1bP25119 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC10.79□□□□□ -0.68
Tnfrsf1bP25119 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC10.79□□□□□ -0.68
Tnfrsf1bP25119 Gm6397-201ENSMUST00000161973 1069 ntBASIC10.79□□□□□ -0.68
Tnfrsf1bP25119 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC10.79□□□□□ -0.68
Tnfrsf1bP25119 Mir8093-201ENSMUST00000185043 137 ntBASIC10.79□□□□□ -0.68
Tnfrsf1bP25119 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Tnfrsf1bP25119 Gm29331-201ENSMUST00000187215 605 ntTSL 5 BASIC10.79□□□□□ -0.68
Tnfrsf1bP25119 Gm29499-201ENSMUST00000189151 486 ntBASIC10.79□□□□□ -0.68
Tnfrsf1bP25119 Gm28329-201ENSMUST00000191208 689 ntBASIC10.79□□□□□ -0.68
Tnfrsf1bP25119 Gm29171-201ENSMUST00000191397 486 ntBASIC10.79□□□□□ -0.68
Tnfrsf1bP25119 Gm19331-201ENSMUST00000193799 1092 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Tnfrsf1bP25119 Gm38314-201ENSMUST00000195709 625 ntBASIC10.79□□□□□ -0.68
Tnfrsf1bP25119 Gm43378-201ENSMUST00000199336 582 ntBASIC10.79□□□□□ -0.68
Tnfrsf1bP25119 Gm9555-201ENSMUST00000200908 583 ntBASIC10.79□□□□□ -0.68
Tnfrsf1bP25119 Gm15396-201ENSMUST00000209101 1089 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Tnfrsf1bP25119 Gm7207-201ENSMUST00000211575 1067 ntBASIC10.79□□□□□ -0.68
Tnfrsf1bP25119 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC10.79□□□□□ -0.68
Tnfrsf1bP25119 AC153912.1-201ENSMUST00000217011 724 ntAPPRIS P1 TSL 3 BASIC10.79□□□□□ -0.68
Tnfrsf1bP25119 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tnfrsf1bP25119 AC154828.2-201ENSMUST00000220908 1070 ntBASIC10.79□□□□□ -0.68
Tnfrsf1bP25119 CT009713.8-202ENSMUST00000224732 385 ntBASIC10.79□□□□□ -0.68
Tnfrsf1bP25119 Prr9-201ENSMUST00000070284 1183 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tnfrsf1bP25119 Gm7551-201ENSMUST00000089593 1074 ntBASIC10.79□□□□□ -0.68
Tnfrsf1bP25119 Gm42829-201ENSMUST00000198417 2585 ntBASIC10.79□□□□□ -0.68
Tnfrsf1bP25119 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tnfrsf1bP25119 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
Tnfrsf1bP25119 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tnfrsf1bP25119 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Tnfrsf1bP25119 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tnfrsf1bP25119 Gm5380-201ENSMUST00000119296 2136 ntBASIC10.79□□□□□ -0.68
Tnfrsf1bP25119 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tnfrsf1bP25119 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tnfrsf1bP25119 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tnfrsf1bP25119 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Tnfrsf1bP25119 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tnfrsf1bP25119 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tnfrsf1bP25119 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Tnfrsf1bP25119 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tnfrsf1bP25119 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tnfrsf1bP25119 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tnfrsf1bP25119 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tnfrsf1bP25119 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Tnfrsf1bP25119 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Tnfrsf1bP25119 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Tnfrsf1bP25119 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Tnfrsf1bP25119 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Tnfrsf1bP25119 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC10.78□□□□□ -0.68
Tnfrsf1bP25119 Gm3836-201ENSMUST00000211377 1613 ntBASIC10.78□□□□□ -0.68
Tnfrsf1bP25119 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Tnfrsf1bP25119 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Tnfrsf1bP25119 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Tnfrsf1bP25119 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Tnfrsf1bP25119 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC10.78□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms