Protein–RNA interactions for Protein: P0CG49

Ubb, Polyubiquitin-B, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UbbP0CG49 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC10.11□□□□□ -0.79
UbbP0CG49 Armc1-201ENSMUST00000029125 3673 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
UbbP0CG49 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
UbbP0CG49 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
UbbP0CG49 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
UbbP0CG49 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
UbbP0CG49 Gm44826-201ENSMUST00000207648 2332 ntBASIC10.11□□□□□ -0.79
UbbP0CG49 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
UbbP0CG49 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
UbbP0CG49 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
UbbP0CG49 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
UbbP0CG49 Gm5847-201ENSMUST00000178959 1595 ntBASIC10.11□□□□□ -0.79
UbbP0CG49 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC10.11□□□□□ -0.79
UbbP0CG49 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
UbbP0CG49 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
UbbP0CG49 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC10.11□□□□□ -0.79
UbbP0CG49 Grem1-201ENSMUST00000099575 4148 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
UbbP0CG49 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
UbbP0CG49 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
UbbP0CG49 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
UbbP0CG49 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
UbbP0CG49 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
UbbP0CG49 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC10.11□□□□□ -0.79
UbbP0CG49 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC10.11□□□□□ -0.79
UbbP0CG49 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
UbbP0CG49 Gm8602-201ENSMUST00000184045 607 ntBASIC10.11□□□□□ -0.79
UbbP0CG49 Gm5370-201ENSMUST00000187187 574 ntBASIC10.11□□□□□ -0.79
UbbP0CG49 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC10.11□□□□□ -0.79
UbbP0CG49 Gm43118-201ENSMUST00000199149 775 ntBASIC10.11□□□□□ -0.79
UbbP0CG49 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC10.11□□□□□ -0.79
UbbP0CG49 Gm5950-201ENSMUST00000213337 772 ntBASIC10.11□□□□□ -0.79
UbbP0CG49 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
UbbP0CG49 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC10.11□□□□□ -0.79
UbbP0CG49 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
UbbP0CG49 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
UbbP0CG49 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
UbbP0CG49 Tdrd3-202ENSMUST00000168275 2657 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
UbbP0CG49 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
UbbP0CG49 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
UbbP0CG49 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
UbbP0CG49 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
UbbP0CG49 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC10.11□□□□□ -0.79
UbbP0CG49 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
UbbP0CG49 Tmc5-202ENSMUST00000098088 3774 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
UbbP0CG49 Cd300lg-201ENSMUST00000017453 2353 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
UbbP0CG49 Chic1-201ENSMUST00000116547 7375 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
UbbP0CG49 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
UbbP0CG49 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC10.11□□□□□ -0.79
UbbP0CG49 AC167669.2-201ENSMUST00000224417 1620 ntBASIC10.11□□□□□ -0.79
UbbP0CG49 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
UbbP0CG49 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC10.11□□□□□ -0.79
UbbP0CG49 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
UbbP0CG49 Gm40617-201ENSMUST00000218840 2420 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
UbbP0CG49 Armt1-201ENSMUST00000095893 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
UbbP0CG49 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
UbbP0CG49 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
UbbP0CG49 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
UbbP0CG49 Ebf2-203ENSMUST00000176161 5204 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
UbbP0CG49 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
UbbP0CG49 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC10.1□□□□□ -0.79
UbbP0CG49 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC10.1□□□□□ -0.79
UbbP0CG49 Vrtn-203ENSMUST00000167227 3440 ntAPPRIS P1 TSL 3 BASIC10.1□□□□□ -0.79
UbbP0CG49 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
UbbP0CG49 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
UbbP0CG49 Clip1-202ENSMUST00000063905 4589 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
UbbP0CG49 AI854703-201ENSMUST00000095938 3517 ntAPPRIS P1 TSL 2 BASIC10.1□□□□□ -0.79
UbbP0CG49 Wdr78-203ENSMUST00000106868 4045 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
UbbP0CG49 Kbtbd12-206ENSMUST00000184878 3351 ntTSL 5 BASIC10.1□□□□□ -0.79
UbbP0CG49 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
UbbP0CG49 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC10.1□□□□□ -0.79
UbbP0CG49 Cacna2d4-201ENSMUST00000037434 5803 ntAPPRIS P3 TSL 2 BASIC10.1□□□□□ -0.79
UbbP0CG49 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
UbbP0CG49 Kalrn-202ENSMUST00000089655 6506 ntTSL 5 BASIC10.1□□□□□ -0.79
UbbP0CG49 Zbtb21-202ENSMUST00000063605 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
UbbP0CG49 Agrn-203ENSMUST00000105575 7262 ntTSL 5 BASIC10.1□□□□□ -0.79
UbbP0CG49 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
UbbP0CG49 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
UbbP0CG49 Gm11989-201ENSMUST00000117240 672 ntBASIC10.1□□□□□ -0.79
UbbP0CG49 Gm11362-201ENSMUST00000118838 850 ntBASIC10.1□□□□□ -0.79
UbbP0CG49 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC10.1□□□□□ -0.79
UbbP0CG49 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC10.1□□□□□ -0.79
UbbP0CG49 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
UbbP0CG49 Gm43133-201ENSMUST00000197472 463 ntBASIC10.1□□□□□ -0.79
UbbP0CG49 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC10.1□□□□□ -0.79
UbbP0CG49 CT571245.2-201ENSMUST00000218421 305 ntBASIC10.1□□□□□ -0.79
UbbP0CG49 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
UbbP0CG49 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
UbbP0CG49 Gm10312-201ENSMUST00000078515 489 ntBASIC10.1□□□□□ -0.79
UbbP0CG49 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
UbbP0CG49 AC129336.1-201ENSMUST00000220224 2277 ntBASIC10.1□□□□□ -0.79
UbbP0CG49 Dld-201ENSMUST00000110857 2544 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
UbbP0CG49 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
UbbP0CG49 Gm10646-201ENSMUST00000213227 3293 ntTSL 2 BASIC10.1□□□□□ -0.79
UbbP0CG49 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
UbbP0CG49 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC10.1□□□□□ -0.79
UbbP0CG49 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC10.1□□□□□ -0.79
UbbP0CG49 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
UbbP0CG49 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
UbbP0CG49 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
UbbP0CG49 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms