Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC17.27■□□□□ 0.36
NclP09405 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC17.27■□□□□ 0.36
NclP09405 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
NclP09405 CT009546.1-201ENSMUST00000222573 1120 ntBASIC17.27■□□□□ 0.36
NclP09405 AC164437.3-201ENSMUST00000228323 347 ntBASIC17.27■□□□□ 0.36
NclP09405 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
NclP09405 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
NclP09405 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
NclP09405 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
NclP09405 Gm43051-201ENSMUST00000201096 2678 ntBASIC17.27■□□□□ 0.35
NclP09405 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
NclP09405 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
NclP09405 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
NclP09405 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
NclP09405 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
NclP09405 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NclP09405 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
NclP09405 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC17.26■□□□□ 0.35
NclP09405 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NclP09405 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NclP09405 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NclP09405 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
NclP09405 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NclP09405 Gm15615-201ENSMUST00000118876 198 ntBASIC17.26■□□□□ 0.35
NclP09405 Gm11960-201ENSMUST00000122068 925 ntBASIC17.26■□□□□ 0.35
NclP09405 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NclP09405 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC17.26■□□□□ 0.35
NclP09405 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NclP09405 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NclP09405 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NclP09405 Gm43058-201ENSMUST00000197645 625 ntBASIC17.26■□□□□ 0.35
NclP09405 Gm44315-201ENSMUST00000203041 219 ntBASIC17.26■□□□□ 0.35
NclP09405 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NclP09405 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC17.26■□□□□ 0.35
NclP09405 AC153961.1-201ENSMUST00000217760 385 ntBASIC17.26■□□□□ 0.35
NclP09405 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC17.26■□□□□ 0.35
NclP09405 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NclP09405 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NclP09405 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
NclP09405 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NclP09405 AC093022.4-203ENSMUST00000228523 2657 ntBASIC17.26■□□□□ 0.35
NclP09405 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NclP09405 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
NclP09405 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
NclP09405 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NclP09405 Gm37648-201ENSMUST00000192072 2563 ntBASIC17.26■□□□□ 0.35
NclP09405 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NclP09405 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NclP09405 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NclP09405 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NclP09405 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
NclP09405 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NclP09405 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
NclP09405 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
NclP09405 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NclP09405 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NclP09405 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
NclP09405 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
NclP09405 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NclP09405 Gm13182-201ENSMUST00000122241 312 ntBASIC17.25■□□□□ 0.35
NclP09405 Mir1901-201ENSMUST00000122616 78 ntBASIC17.25■□□□□ 0.35
NclP09405 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NclP09405 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
NclP09405 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC17.25■□□□□ 0.35
NclP09405 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC17.25■□□□□ 0.35
NclP09405 Gm17877-201ENSMUST00000192578 814 ntBASIC17.25■□□□□ 0.35
NclP09405 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC17.25■□□□□ 0.35
NclP09405 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC17.25■□□□□ 0.35
NclP09405 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NclP09405 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NclP09405 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NclP09405 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NclP09405 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NclP09405 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NclP09405 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
NclP09405 Gm19817-201ENSMUST00000199764 2132 ntBASIC17.24■□□□□ 0.35
NclP09405 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
NclP09405 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
NclP09405 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
NclP09405 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NclP09405 Gm44831-201ENSMUST00000208469 2989 ntBASIC17.24■□□□□ 0.35
NclP09405 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
NclP09405 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
NclP09405 Gm11628-201ENSMUST00000117568 171 ntBASIC17.24■□□□□ 0.35
NclP09405 Gm12899-201ENSMUST00000120565 551 ntBASIC17.24■□□□□ 0.35
NclP09405 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NclP09405 Gm7741-201ENSMUST00000181445 989 ntBASIC17.24■□□□□ 0.35
NclP09405 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NclP09405 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
NclP09405 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC17.24■□□□□ 0.35
NclP09405 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
NclP09405 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC17.24■□□□□ 0.35
NclP09405 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
NclP09405 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NclP09405 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
NclP09405 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
NclP09405 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
NclP09405 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
NclP09405 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
NclP09405 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms