Protein–RNA interactions for Protein: P09026

Hoxb3, Homeobox protein Hox-B3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb3P09026 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC11.83□□□□□ -0.52
Hoxb3P09026 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC11.83□□□□□ -0.52
Hoxb3P09026 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Hoxb3P09026 Gm13267-202ENSMUST00000150099 281 ntTSL 2 BASIC11.83□□□□□ -0.52
Hoxb3P09026 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC11.83□□□□□ -0.52
Hoxb3P09026 Hsd11b1-203ENSMUST00000160929 1256 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hoxb3P09026 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC11.83□□□□□ -0.52
Hoxb3P09026 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Hoxb3P09026 Gm29548-201ENSMUST00000187012 694 ntBASIC11.83□□□□□ -0.52
Hoxb3P09026 Gm28105-201ENSMUST00000187788 694 ntBASIC11.83□□□□□ -0.52
Hoxb3P09026 1700088E04Rik-207ENSMUST00000188562 631 ntTSL 3 BASIC11.83□□□□□ -0.52
Hoxb3P09026 Gm20568-201ENSMUST00000197129 208 ntBASIC11.83□□□□□ -0.52
Hoxb3P09026 Gm42947-201ENSMUST00000198230 675 ntTSL 2 BASIC11.83□□□□□ -0.52
Hoxb3P09026 9930120I10Rik-201ENSMUST00000203027 865 ntBASIC11.83□□□□□ -0.52
Hoxb3P09026 AC122408.1-201ENSMUST00000218949 218 ntBASIC11.83□□□□□ -0.52
Hoxb3P09026 Sapcd1-201ENSMUST00000040151 935 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hoxb3P09026 Rhox8-201ENSMUST00000071885 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hoxb3P09026 Ipcef1-202ENSMUST00000086896 1196 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Hoxb3P09026 Trappc3l-201ENSMUST00000095758 1185 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hoxb3P09026 Gm10617-201ENSMUST00000098368 1172 ntBASIC11.83□□□□□ -0.52
Hoxb3P09026 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hoxb3P09026 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hoxb3P09026 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hoxb3P09026 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hoxb3P09026 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC11.83□□□□□ -0.52
Hoxb3P09026 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hoxb3P09026 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Hoxb3P09026 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hoxb3P09026 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hoxb3P09026 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hoxb3P09026 Gm44913-201ENSMUST00000208060 2990 ntBASIC11.83□□□□□ -0.52
Hoxb3P09026 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Hoxb3P09026 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hoxb3P09026 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hoxb3P09026 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC11.83□□□□□ -0.52
Hoxb3P09026 Glrb-206ENSMUST00000194085 1341 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Hoxb3P09026 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Hoxb3P09026 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hoxb3P09026 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hoxb3P09026 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Hoxb3P09026 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hoxb3P09026 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC11.82□□□□□ -0.52
Hoxb3P09026 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Hoxb3P09026 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hoxb3P09026 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Hoxb3P09026 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hoxb3P09026 AC159195.1-201ENSMUST00000225867 2086 ntBASIC11.82□□□□□ -0.52
Hoxb3P09026 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Hoxb3P09026 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hoxb3P09026 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Hoxb3P09026 Gm24891-201ENSMUST00000104391 136 ntBASIC11.82□□□□□ -0.52
Hoxb3P09026 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC11.82□□□□□ -0.52
Hoxb3P09026 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Hoxb3P09026 Srd5a3-202ENSMUST00000113506 1241 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Hoxb3P09026 Itpa-ps1-201ENSMUST00000117207 597 ntBASIC11.82□□□□□ -0.52
Hoxb3P09026 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC11.82□□□□□ -0.52
Hoxb3P09026 Gm15658-201ENSMUST00000148293 574 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Hoxb3P09026 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC11.82□□□□□ -0.52
Hoxb3P09026 Gm23085-201ENSMUST00000157849 293 ntBASIC11.82□□□□□ -0.52
Hoxb3P09026 Vmn1r-ps143-201ENSMUST00000176730 604 ntBASIC11.82□□□□□ -0.52
Hoxb3P09026 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Hoxb3P09026 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Hoxb3P09026 2310009A05Rik-201ENSMUST00000184126 496 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Hoxb3P09026 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hoxb3P09026 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC11.82□□□□□ -0.52
Hoxb3P09026 Gm2965-201ENSMUST00000198365 343 ntBASIC11.82□□□□□ -0.52
Hoxb3P09026 Zfp799-202ENSMUST00000201499 651 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Hoxb3P09026 Gm44237-201ENSMUST00000205183 936 ntBASIC11.82□□□□□ -0.52
Hoxb3P09026 5033424D13Rik-201ENSMUST00000221779 648 ntBASIC11.82□□□□□ -0.52
Hoxb3P09026 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC11.82□□□□□ -0.52
Hoxb3P09026 AC113282.2-201ENSMUST00000224012 945 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Hoxb3P09026 AC113282.3-201ENSMUST00000224757 942 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Hoxb3P09026 AC151275.1-201ENSMUST00000224870 585 ntBASIC11.82□□□□□ -0.52
Hoxb3P09026 AC154634.2-201ENSMUST00000225983 1184 ntBASIC11.82□□□□□ -0.52
Hoxb3P09026 Ptma-201ENSMUST00000045897 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hoxb3P09026 Gm5705-201ENSMUST00000066241 711 ntBASIC11.82□□□□□ -0.52
Hoxb3P09026 Gm10288-201ENSMUST00000084614 537 ntBASIC11.82□□□□□ -0.52
Hoxb3P09026 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hoxb3P09026 Olfr547-201ENSMUST00000098229 936 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Hoxb3P09026 Olfr1098-201ENSMUST00000099872 948 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Hoxb3P09026 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hoxb3P09026 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Hoxb3P09026 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hoxb3P09026 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hoxb3P09026 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC11.82□□□□□ -0.52
Hoxb3P09026 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hoxb3P09026 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hoxb3P09026 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC11.82□□□□□ -0.52
Hoxb3P09026 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hoxb3P09026 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hoxb3P09026 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hoxb3P09026 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Hoxb3P09026 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxb3P09026 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxb3P09026 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxb3P09026 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Hoxb3P09026 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Hoxb3P09026 Gm5780-201ENSMUST00000217774 1834 ntBASIC11.81□□□□□ -0.52
Hoxb3P09026 AC126257.1-201ENSMUST00000213195 1536 ntBASIC11.81□□□□□ -0.52
Hoxb3P09026 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms