Protein–RNA interactions for Protein: P09025

Hoxc8, Homeobox protein Hox-C8, mousemouse

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc8P09025 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxc8P09025 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxc8P09025 Pde4b-206ENSMUST00000106907 1374 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxc8P09025 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Hoxc8P09025 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxc8P09025 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC12.31□□□□□ -0.44
Hoxc8P09025 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Hoxc8P09025 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Hoxc8P09025 Gm44106-201ENSMUST00000203153 1599 ntBASIC12.31□□□□□ -0.44
Hoxc8P09025 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxc8P09025 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxc8P09025 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxc8P09025 Gm11986-201ENSMUST00000149481 1439 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxc8P09025 E330011O21Rik-202ENSMUST00000209498 1403 ntTSL 5 BASIC12.31□□□□□ -0.44
Hoxc8P09025 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC12.31□□□□□ -0.44
Hoxc8P09025 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxc8P09025 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
Hoxc8P09025 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC12.31□□□□□ -0.44
Hoxc8P09025 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxc8P09025 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxc8P09025 Gm11554-201ENSMUST00000105056 890 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Hoxc8P09025 Gm6158-201ENSMUST00000109467 904 ntBASIC12.31□□□□□ -0.44
Hoxc8P09025 Banf2-202ENSMUST00000110032 409 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxc8P09025 Gm13047-201ENSMUST00000117116 815 ntBASIC12.31□□□□□ -0.44
Hoxc8P09025 Gm11578-201ENSMUST00000118530 459 ntBASIC12.31□□□□□ -0.44
Hoxc8P09025 Rpl10-ps1-201ENSMUST00000119438 645 ntBASIC12.31□□□□□ -0.44
Hoxc8P09025 Gm11979-201ENSMUST00000119629 743 ntBASIC12.31□□□□□ -0.44
Hoxc8P09025 Gm14165-201ENSMUST00000121456 952 ntBASIC12.31□□□□□ -0.44
Hoxc8P09025 Gm3828-201ENSMUST00000121817 257 ntBASIC12.31□□□□□ -0.44
Hoxc8P09025 Gm15911-201ENSMUST00000138992 809 ntTSL 3 BASIC12.31□□□□□ -0.44
Hoxc8P09025 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC12.31□□□□□ -0.44
Hoxc8P09025 Pet100-201ENSMUST00000156380 1193 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxc8P09025 Gm20822-201ENSMUST00000165756 687 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Hoxc8P09025 Gm17070-201ENSMUST00000170463 784 ntBASIC12.31□□□□□ -0.44
Hoxc8P09025 Gm20828-201ENSMUST00000170889 687 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Hoxc8P09025 Gm21964-201ENSMUST00000178785 936 ntTSL 5 BASIC12.31□□□□□ -0.44
Hoxc8P09025 Gm28760-202ENSMUST00000190376 481 ntTSL 5 BASIC12.31□□□□□ -0.44
Hoxc8P09025 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC12.31□□□□□ -0.44
Hoxc8P09025 Gm42867-201ENSMUST00000202995 469 ntBASIC12.31□□□□□ -0.44
Hoxc8P09025 AC122024.3-201ENSMUST00000217719 294 ntBASIC12.31□□□□□ -0.44
Hoxc8P09025 AC140375.1-201ENSMUST00000225421 694 ntBASIC12.31□□□□□ -0.44
Hoxc8P09025 Cxcl1-201ENSMUST00000031327 953 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxc8P09025 Banf2-201ENSMUST00000037722 571 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxc8P09025 Lsm8-201ENSMUST00000056398 807 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxc8P09025 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxc8P09025 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxc8P09025 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxc8P09025 Gm37651-201ENSMUST00000194679 1494 ntBASIC12.31□□□□□ -0.44
Hoxc8P09025 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxc8P09025 AC122840.1-201ENSMUST00000220915 3334 ntBASIC12.31□□□□□ -0.44
Hoxc8P09025 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxc8P09025 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxc8P09025 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Hoxc8P09025 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxc8P09025 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxc8P09025 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxc8P09025 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxc8P09025 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxc8P09025 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxc8P09025 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxc8P09025 Gm43365-201ENSMUST00000196522 2106 ntBASIC12.31□□□□□ -0.44
Hoxc8P09025 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxc8P09025 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxc8P09025 Ikzf2-204ENSMUST00000188110 1365 ntTSL 5 BASIC12.3□□□□□ -0.44
Hoxc8P09025 Ikzf2-208ENSMUST00000190855 1359 ntTSL 5 BASIC12.3□□□□□ -0.44
Hoxc8P09025 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Hoxc8P09025 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Hoxc8P09025 Kif22-ps-201ENSMUST00000119302 1984 ntBASIC12.3□□□□□ -0.44
Hoxc8P09025 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Hoxc8P09025 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hoxc8P09025 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hoxc8P09025 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hoxc8P09025 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Hoxc8P09025 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hoxc8P09025 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC12.3□□□□□ -0.44
Hoxc8P09025 Arhgap19-204ENSMUST00000177495 1652 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Hoxc8P09025 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Hoxc8P09025 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC12.3□□□□□ -0.44
Hoxc8P09025 Gm14274-201ENSMUST00000117182 615 ntBASIC12.3□□□□□ -0.44
Hoxc8P09025 Gm15036-201ENSMUST00000118880 400 ntBASIC12.3□□□□□ -0.44
Hoxc8P09025 Gm19013-201ENSMUST00000183895 1222 ntBASIC12.3□□□□□ -0.44
Hoxc8P09025 Gm19014-201ENSMUST00000184828 1189 ntBASIC12.3□□□□□ -0.44
Hoxc8P09025 Gm42430-201ENSMUST00000197209 616 ntBASIC12.3□□□□□ -0.44
Hoxc8P09025 1700017M07Rik-201ENSMUST00000198307 940 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Hoxc8P09025 Gm44552-201ENSMUST00000205458 1247 ntBASIC12.3□□□□□ -0.44
Hoxc8P09025 Gm44814-201ENSMUST00000207018 434 ntBASIC12.3□□□□□ -0.44
Hoxc8P09025 Gm45613-201ENSMUST00000210718 443 ntTSL 3 BASIC12.3□□□□□ -0.44
Hoxc8P09025 Gm30978-201ENSMUST00000211581 1066 ntTSL 5 BASIC12.3□□□□□ -0.44
Hoxc8P09025 Gm39397-201ENSMUST00000212331 228 ntTSL 5 BASIC12.3□□□□□ -0.44
Hoxc8P09025 Cenpu-202ENSMUST00000093518 783 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Hoxc8P09025 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Hoxc8P09025 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Hoxc8P09025 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Hoxc8P09025 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Hoxc8P09025 Atp6v1e1-201ENSMUST00000019354 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hoxc8P09025 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hoxc8P09025 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Hoxc8P09025 Mypopos-202ENSMUST00000205975 2321 ntBASIC12.29□□□□□ -0.44
Hoxc8P09025 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hoxc8P09025 Gm9244-201ENSMUST00000056767 2129 ntBASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 81.4 ms