Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Gm12846-201ENSMUST00000120431 1373 ntBASIC11□□□□□ -0.65
ApoeP08226 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
ApoeP08226 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
ApoeP08226 Tmc5-202ENSMUST00000098088 3774 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
ApoeP08226 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
ApoeP08226 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC11□□□□□ -0.65
ApoeP08226 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC11□□□□□ -0.65
ApoeP08226 Topors-201ENSMUST00000042575 3856 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
ApoeP08226 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC11□□□□□ -0.65
ApoeP08226 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
ApoeP08226 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC11□□□□□ -0.65
ApoeP08226 Ncor2-202ENSMUST00000086083 8575 ntAPPRIS P2 TSL 5 BASIC11□□□□□ -0.65
ApoeP08226 Fasn-205ENSMUST00000206589 8333 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
ApoeP08226 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
ApoeP08226 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
ApoeP08226 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
ApoeP08226 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
ApoeP08226 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
ApoeP08226 Lrtm2-204ENSMUST00000168793 3407 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
ApoeP08226 Gm10829-201ENSMUST00000202084 2988 ntBASIC10.99□□□□□ -0.65
ApoeP08226 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC10.99□□□□□ -0.65
ApoeP08226 Acin1-203ENSMUST00000111484 4048 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
ApoeP08226 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
ApoeP08226 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
ApoeP08226 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
ApoeP08226 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
ApoeP08226 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC10.99□□□□□ -0.65
ApoeP08226 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
ApoeP08226 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
ApoeP08226 Arpc3-202ENSMUST00000102525 899 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
ApoeP08226 Gm12490-201ENSMUST00000120255 560 ntBASIC10.99□□□□□ -0.65
ApoeP08226 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
ApoeP08226 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC10.99□□□□□ -0.65
ApoeP08226 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC10.99□□□□□ -0.65
ApoeP08226 Wdyhv1-206ENSMUST00000227142 786 ntBASIC10.99□□□□□ -0.65
ApoeP08226 AC154462.2-201ENSMUST00000227519 370 ntBASIC10.99□□□□□ -0.65
ApoeP08226 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
ApoeP08226 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC10.99□□□□□ -0.65
ApoeP08226 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
ApoeP08226 Amotl1-201ENSMUST00000013220 8957 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
ApoeP08226 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
ApoeP08226 AC167565.1-201ENSMUST00000226980 1833 ntBASIC10.99□□□□□ -0.65
ApoeP08226 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
ApoeP08226 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
ApoeP08226 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
ApoeP08226 Gm5833-202ENSMUST00000190707 1932 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
ApoeP08226 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC10.99□□□□□ -0.65
ApoeP08226 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
ApoeP08226 Triobp-204ENSMUST00000109690 7023 ntAPPRIS P4 TSL 1 (best) BASIC10.99□□□□□ -0.65
ApoeP08226 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC10.99□□□□□ -0.65
ApoeP08226 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
ApoeP08226 Thbs4-201ENSMUST00000022213 3198 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
ApoeP08226 Hpcal4-201ENSMUST00000059667 4931 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
ApoeP08226 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
ApoeP08226 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
ApoeP08226 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
ApoeP08226 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
ApoeP08226 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
ApoeP08226 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
ApoeP08226 Actl7a-201ENSMUST00000095079 1513 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
ApoeP08226 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
ApoeP08226 Fibcd1-201ENSMUST00000028188 4751 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
ApoeP08226 Gm28035-201ENSMUST00000139454 4238 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
ApoeP08226 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
ApoeP08226 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
ApoeP08226 Tom1l2-204ENSMUST00000095254 4940 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
ApoeP08226 Gm10912-201ENSMUST00000104891 1661 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
ApoeP08226 Ror2-202ENSMUST00000130235 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
ApoeP08226 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
ApoeP08226 Sp140-201ENSMUST00000080204 2417 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
ApoeP08226 Acot9-201ENSMUST00000026324 1752 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
ApoeP08226 AC107453.4-201ENSMUST00000227068 1817 ntBASIC10.98□□□□□ -0.65
ApoeP08226 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
ApoeP08226 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC10.98□□□□□ -0.65
ApoeP08226 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
ApoeP08226 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
ApoeP08226 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC10.98□□□□□ -0.65
ApoeP08226 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
ApoeP08226 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC10.98□□□□□ -0.65
ApoeP08226 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC10.98□□□□□ -0.65
ApoeP08226 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
ApoeP08226 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC10.98□□□□□ -0.65
ApoeP08226 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
ApoeP08226 Gm18187-201ENSMUST00000196476 984 ntBASIC10.98□□□□□ -0.65
ApoeP08226 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
ApoeP08226 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
ApoeP08226 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC10.98□□□□□ -0.65
ApoeP08226 Zbtb21-202ENSMUST00000063605 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
ApoeP08226 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
ApoeP08226 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
ApoeP08226 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC10.98□□□□□ -0.65
ApoeP08226 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC10.98□□□□□ -0.65
ApoeP08226 Gm4864-201ENSMUST00000219894 1461 ntBASIC10.98□□□□□ -0.65
ApoeP08226 Srsf6-203ENSMUST00000130411 3527 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
ApoeP08226 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
ApoeP08226 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
ApoeP08226 Gm37613-201ENSMUST00000195677 3580 ntBASIC10.98□□□□□ -0.65
ApoeP08226 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
ApoeP08226 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC10.98□□□□□ -0.65
ApoeP08226 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 77.2 ms