Protein–RNA interactions for Protein: P07309

Ttr, Transthyretin, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TtrP07309 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
TtrP07309 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
TtrP07309 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC8.4□□□□□ -1.07
TtrP07309 Nap1l2-201ENSMUST00000121720 2465 ntAPPRIS P1 BASIC8.4□□□□□ -1.07
TtrP07309 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
TtrP07309 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
TtrP07309 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC8.4□□□□□ -1.07
TtrP07309 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC8.4□□□□□ -1.07
TtrP07309 Thsd7b-202ENSMUST00000073527 6213 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
TtrP07309 Tfrc-201ENSMUST00000023486 4890 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
TtrP07309 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
TtrP07309 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
TtrP07309 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
TtrP07309 Gm38140-201ENSMUST00000193617 2755 ntBASIC8.39□□□□□ -1.07
TtrP07309 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
TtrP07309 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
TtrP07309 Usp45-201ENSMUST00000040429 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
TtrP07309 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
TtrP07309 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC8.39□□□□□ -1.07
TtrP07309 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
TtrP07309 Zdhhc21-201ENSMUST00000030110 8763 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
TtrP07309 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
TtrP07309 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
TtrP07309 Brat1-202ENSMUST00000100505 3431 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
TtrP07309 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
TtrP07309 Ppp1r12a-205ENSMUST00000219263 3355 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
TtrP07309 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
TtrP07309 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
TtrP07309 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC8.39□□□□□ -1.07
TtrP07309 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
TtrP07309 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
TtrP07309 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
TtrP07309 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
TtrP07309 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
TtrP07309 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC8.39□□□□□ -1.07
TtrP07309 Gm8801-201ENSMUST00000173255 1064 ntBASIC8.39□□□□□ -1.07
TtrP07309 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC8.39□□□□□ -1.07
TtrP07309 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC8.39□□□□□ -1.07
TtrP07309 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
TtrP07309 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC8.39□□□□□ -1.07
TtrP07309 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
TtrP07309 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC8.39□□□□□ -1.07
TtrP07309 AC158982.1-201ENSMUST00000228377 901 ntBASIC8.39□□□□□ -1.07
TtrP07309 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
TtrP07309 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
TtrP07309 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC8.39□□□□□ -1.07
TtrP07309 Col6a5-203ENSMUST00000190193 9289 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
TtrP07309 Dchs2-201ENSMUST00000191829 10783 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
TtrP07309 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC8.39□□□□□ -1.07
TtrP07309 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC8.39□□□□□ -1.07
TtrP07309 Fbxl20-201ENSMUST00000103143 8601 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
TtrP07309 Cyp2s1-202ENSMUST00000108395 3161 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
TtrP07309 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
TtrP07309 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
TtrP07309 Gm44755-201ENSMUST00000207830 2102 ntBASIC8.39□□□□□ -1.07
TtrP07309 Als2-201ENSMUST00000027178 6342 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
TtrP07309 Slc16a1-201ENSMUST00000046212 4426 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
TtrP07309 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
TtrP07309 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC8.39□□□□□ -1.07
TtrP07309 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
TtrP07309 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
TtrP07309 Ap2b1-201ENSMUST00000018875 5625 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
TtrP07309 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
TtrP07309 Celsr2-201ENSMUST00000090558 10598 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
TtrP07309 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
TtrP07309 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
TtrP07309 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC8.39□□□□□ -1.07
TtrP07309 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
TtrP07309 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
TtrP07309 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
TtrP07309 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
TtrP07309 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
TtrP07309 Gm18626-201ENSMUST00000221512 1409 ntBASIC8.38□□□□□ -1.07
TtrP07309 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC8.38□□□□□ -1.07
TtrP07309 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
TtrP07309 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
TtrP07309 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC8.38□□□□□ -1.07
TtrP07309 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
TtrP07309 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC8.38□□□□□ -1.07
TtrP07309 Gm42141-201ENSMUST00000196534 2172 ntBASIC8.38□□□□□ -1.07
TtrP07309 Gm12846-201ENSMUST00000120431 1373 ntBASIC8.38□□□□□ -1.07
TtrP07309 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC8.38□□□□□ -1.07
TtrP07309 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC8.38□□□□□ -1.07
TtrP07309 Wdr78-203ENSMUST00000106868 4045 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
TtrP07309 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
TtrP07309 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
TtrP07309 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
TtrP07309 Tsc22d4-202ENSMUST00000100539 3983 ntAPPRIS P2 TSL 1 (best) BASIC8.38□□□□□ -1.07
TtrP07309 Itgb8-201ENSMUST00000026360 8403 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
TtrP07309 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
TtrP07309 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
TtrP07309 Plekhb1-205ENSMUST00000107046 2793 ntAPPRIS ALT1 TSL 1 (best) BASIC8.38□□□□□ -1.07
TtrP07309 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
TtrP07309 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC8.38□□□□□ -1.07
TtrP07309 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC8.38□□□□□ -1.07
TtrP07309 Gm10434-201ENSMUST00000101158 471 ntBASIC8.38□□□□□ -1.07
TtrP07309 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
TtrP07309 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC8.38□□□□□ -1.07
TtrP07309 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC8.38□□□□□ -1.07
TtrP07309 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC8.38□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms