Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TnfP06804 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TnfP06804 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
TnfP06804 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC12.32□□□□□ -0.44
TnfP06804 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
TnfP06804 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
TnfP06804 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
TnfP06804 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC12.32□□□□□ -0.44
TnfP06804 Gm44190-201ENSMUST00000205083 1401 ntBASIC12.32□□□□□ -0.44
TnfP06804 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
TnfP06804 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
TnfP06804 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
TnfP06804 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
TnfP06804 Gm13182-201ENSMUST00000122241 312 ntBASIC12.32□□□□□ -0.44
TnfP06804 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC12.32□□□□□ -0.44
TnfP06804 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC12.32□□□□□ -0.44
TnfP06804 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
TnfP06804 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC12.32□□□□□ -0.44
TnfP06804 Gm37826-201ENSMUST00000195329 322 ntBASIC12.32□□□□□ -0.44
TnfP06804 Gm34023-201ENSMUST00000195539 217 ntBASIC12.32□□□□□ -0.44
TnfP06804 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
TnfP06804 Gm17825-201ENSMUST00000206836 794 ntBASIC12.32□□□□□ -0.44
TnfP06804 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC12.32□□□□□ -0.44
TnfP06804 CT030170.2-201ENSMUST00000223267 126 ntBASIC12.32□□□□□ -0.44
TnfP06804 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TnfP06804 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TnfP06804 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TnfP06804 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
TnfP06804 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TnfP06804 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
TnfP06804 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
TnfP06804 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TnfP06804 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
TnfP06804 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TnfP06804 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC12.32□□□□□ -0.44
TnfP06804 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
TnfP06804 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
TnfP06804 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
TnfP06804 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
TnfP06804 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
TnfP06804 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TnfP06804 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
TnfP06804 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
TnfP06804 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TnfP06804 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TnfP06804 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TnfP06804 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TnfP06804 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
TnfP06804 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
TnfP06804 AC164107.1-201ENSMUST00000227730 2161 ntBASIC12.31□□□□□ -0.44
TnfP06804 Gm26013-201ENSMUST00000104404 119 ntBASIC12.31□□□□□ -0.44
TnfP06804 Gm12899-201ENSMUST00000120565 551 ntBASIC12.31□□□□□ -0.44
TnfP06804 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC12.31□□□□□ -0.44
TnfP06804 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
TnfP06804 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
TnfP06804 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
TnfP06804 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC12.31□□□□□ -0.44
TnfP06804 Gm28388-201ENSMUST00000186262 437 ntBASIC12.31□□□□□ -0.44
TnfP06804 Gm42657-201ENSMUST00000201746 211 ntBASIC12.31□□□□□ -0.44
TnfP06804 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC12.31□□□□□ -0.44
TnfP06804 Gm45219-201ENSMUST00000205602 465 ntBASIC12.31□□□□□ -0.44
TnfP06804 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC12.31□□□□□ -0.44
TnfP06804 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC12.31□□□□□ -0.44
TnfP06804 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TnfP06804 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TnfP06804 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
TnfP06804 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
TnfP06804 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
TnfP06804 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC12.31□□□□□ -0.44
TnfP06804 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TnfP06804 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
TnfP06804 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TnfP06804 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TnfP06804 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TnfP06804 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TnfP06804 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
TnfP06804 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
TnfP06804 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
TnfP06804 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC12.3□□□□□ -0.44
TnfP06804 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
TnfP06804 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TnfP06804 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TnfP06804 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
TnfP06804 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
TnfP06804 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TnfP06804 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC12.3□□□□□ -0.44
TnfP06804 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TnfP06804 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TnfP06804 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TnfP06804 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
TnfP06804 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TnfP06804 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TnfP06804 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TnfP06804 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
TnfP06804 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
TnfP06804 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
TnfP06804 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
TnfP06804 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TnfP06804 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC12.3□□□□□ -0.44
TnfP06804 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms